BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038669
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   1e-13
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      69   4e-10
gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japo...    66   3e-09
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    63   3e-08
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    63   3e-08

>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/72 (55%), Positives = 48/72 (66%)
 Frame = -2

Query: 216 DMLRPVTFAEVHEVVFSIGVLRAPGPDGFPAIFYQNS*DIIGESTHRMVSTFFKECHSLE 37
           D+++PVT  EV  VVF +G L+APGPDG PAIFYQ    I+GE   R VS FF   + L+
Sbjct: 436 DLIKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQ 495

Query: 36  HINHTNIALIPK 1
             N TNI LIPK
Sbjct: 496 EWNQTNICLIPK 507


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
 Frame = -2

Query: 255 FTQIISVSLDGNID-----------------MLRPVTFAEVHEVVFSIGVLRAPGPDGFP 127
           F++I + SL GNI                  + R VT  EV   VFSIG  RAPGPDG  
Sbjct: 195 FSEIFTSSLQGNIQDSLGNINRVVSDECNAYLSRDVTAEEVRISVFSIGATRAPGPDGLT 254

Query: 126 AIFYQNS*DIIGESTHRMVSTFFKECHSLEHINHTNIALIPK 1
           A FYQ   DI+G +    V  FF        +NHTN+ LIPK
Sbjct: 255 ASFYQTYWDIVGPAVVEEVRHFFNTGEFYSDLNHTNLCLIPK 296


>gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japonica Group]
          Length = 813

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/79 (41%), Positives = 48/79 (60%)
 Frame = -2

Query: 237 VSLDGNIDMLRPVTFAEVHEVVFSIGVLRAPGPDGFPAIFYQNS*DIIGESTHRMVSTFF 58
           VS + N+D+ +  T  E+ + +F IG ++APGPDGFPA F+Q + D I +     V +FF
Sbjct: 490 VSPEMNVDLCKDFTEQEIADALFQIGPIKAPGPDGFPARFFQRNWDAIKKDVVSAVKSFF 549

Query: 57  KECHSLEHINHTNIALIPK 1
           +     E +N T I LIPK
Sbjct: 550 ETSIMPEGVNDTAIVLIPK 568


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = -2

Query: 222 NIDMLRPVTFAEVHEVVFSIGVLRAPGPDGFPAIFYQNS*DIIGESTHRMVSTFFKECHS 43
           N+D+ +  +  E+++ +  IG  +APGPDG  A FY+N  DI+G      V  FF+    
Sbjct: 577 NLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFM 636

Query: 42  LEHINHTNIALIPK 1
              INHTNI +IPK
Sbjct: 637 KPSINHTNICMIPK 650


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = -2

Query: 222  NIDMLRPVTFAEVHEVVFSIGVLRAPGPDGFPAIFYQNS*DIIGESTHRMVSTFFKECHS 43
            N+D+ +  +  E+++ +  IG  +APGPDG  A FY+N  DI+G      V  FF+    
Sbjct: 803  NLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFM 862

Query: 42   LEHINHTNIALIPK 1
               INHTNI +IPK
Sbjct: 863  KPSINHTNICMIPK 876