BLASTX nr result
ID: Coptis24_contig00038664
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038664 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas] 114 6e-24 ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2... 112 2e-23 ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250... 112 4e-23 emb|CBI36868.3| unnamed protein product [Vitis vinifera] 112 4e-23 ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi... 112 4e-23 >dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas] Length = 563 Score = 114 bits (286), Expect = 6e-24 Identities = 48/76 (63%), Positives = 62/76 (81%) Frame = -3 Query: 232 KENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDCT 53 KEN+L HSE++A+AYGL+ TK+P I+IVKNLR+C DCHE K+IS +Y REI++RD Sbjct: 488 KENVLYEHSERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIISKIYDREIIVRDRV 547 Query: 52 RFHRFMAGCCSCKDYW 5 RFH+F+ G CSCKDYW Sbjct: 548 RFHKFVNGTCSCKDYW 563 >ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa] Length = 578 Score = 112 bits (281), Expect = 2e-23 Identities = 49/76 (64%), Positives = 61/76 (80%) Frame = -3 Query: 232 KENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDCT 53 KEN+L HSEK+AVA+GL+ST TPI+++KNLRIC DCH +KLIS +Y REI++RD Sbjct: 503 KENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREIIVRDRV 562 Query: 52 RFHRFMAGCCSCKDYW 5 RFHRF G CSC+DYW Sbjct: 563 RFHRFKEGFCSCRDYW 578 >ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera] Length = 1130 Score = 112 bits (279), Expect = 4e-23 Identities = 48/77 (62%), Positives = 59/77 (76%) Frame = -3 Query: 235 GKENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDC 56 GKE L HSEK+A+AYG L T TPI+IVKNLRIC+DCH +K+IS ++ REI++RDC Sbjct: 496 GKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDC 555 Query: 55 TRFHRFMAGCCSCKDYW 5 RFH F G CSC+DYW Sbjct: 556 NRFHHFTQGLCSCRDYW 572 >emb|CBI36868.3| unnamed protein product [Vitis vinifera] Length = 541 Score = 112 bits (279), Expect = 4e-23 Identities = 48/77 (62%), Positives = 59/77 (76%) Frame = -3 Query: 235 GKENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDC 56 GKE L HSEK+A+AYG L T TPI+IVKNLRIC+DCH +K+IS ++ REI++RDC Sbjct: 465 GKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDC 524 Query: 55 TRFHRFMAGCCSCKDYW 5 RFH F G CSC+DYW Sbjct: 525 NRFHHFTQGLCSCRDYW 541 >ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065 [Vitis vinifera] Length = 564 Score = 112 bits (279), Expect = 4e-23 Identities = 47/76 (61%), Positives = 61/76 (80%) Frame = -3 Query: 232 KENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDCT 53 KEN L HSE++A+AYGLL TK+P I+IVKNLR+C DCHE K+IS Y+REI++RD Sbjct: 489 KENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRV 548 Query: 52 RFHRFMAGCCSCKDYW 5 RFH+F+ G CSC+D+W Sbjct: 549 RFHKFVNGSCSCRDFW 564