BLASTX nr result

ID: Coptis24_contig00038664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038664
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          114   6e-24
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250...   112   4e-23
emb|CBI36868.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23

>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  114 bits (286), Expect = 6e-24
 Identities = 48/76 (63%), Positives = 62/76 (81%)
 Frame = -3

Query: 232 KENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDCT 53
           KEN+L  HSE++A+AYGL+ TK+P  I+IVKNLR+C DCHE  K+IS +Y REI++RD  
Sbjct: 488 KENVLYEHSERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIISKIYDREIIVRDRV 547

Query: 52  RFHRFMAGCCSCKDYW 5
           RFH+F+ G CSCKDYW
Sbjct: 548 RFHKFVNGTCSCKDYW 563


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/76 (64%), Positives = 61/76 (80%)
 Frame = -3

Query: 232 KENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDCT 53
           KEN+L  HSEK+AVA+GL+ST   TPI+++KNLRIC DCH  +KLIS +Y REI++RD  
Sbjct: 503 KENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREIIVRDRV 562

Query: 52  RFHRFMAGCCSCKDYW 5
           RFHRF  G CSC+DYW
Sbjct: 563 RFHRFKEGFCSCRDYW 578


>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  112 bits (279), Expect = 4e-23
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = -3

Query: 235 GKENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDC 56
           GKE  L  HSEK+A+AYG L T   TPI+IVKNLRIC+DCH  +K+IS ++ REI++RDC
Sbjct: 496 GKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDC 555

Query: 55  TRFHRFMAGCCSCKDYW 5
            RFH F  G CSC+DYW
Sbjct: 556 NRFHHFTQGLCSCRDYW 572


>emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  112 bits (279), Expect = 4e-23
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = -3

Query: 235 GKENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDC 56
           GKE  L  HSEK+A+AYG L T   TPI+IVKNLRIC+DCH  +K+IS ++ REI++RDC
Sbjct: 465 GKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDC 524

Query: 55  TRFHRFMAGCCSCKDYW 5
            RFH F  G CSC+DYW
Sbjct: 525 NRFHHFTQGLCSCRDYW 541


>ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  112 bits (279), Expect = 4e-23
 Identities = 47/76 (61%), Positives = 61/76 (80%)
 Frame = -3

Query: 232 KENLLDPHSEKVAVAYGLLSTKSPTPIKIVKNLRICQDCHETMKLISTMYKREIVIRDCT 53
           KEN L  HSE++A+AYGLL TK+P  I+IVKNLR+C DCHE  K+IS  Y+REI++RD  
Sbjct: 489 KENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRV 548

Query: 52  RFHRFMAGCCSCKDYW 5
           RFH+F+ G CSC+D+W
Sbjct: 549 RFHKFVNGSCSCRDFW 564


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