BLASTX nr result

ID: Coptis24_contig00038636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038636
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275939.2| PREDICTED: uncharacterized protein LOC100244...   131   7e-29
emb|CBI25305.3| unnamed protein product [Vitis vinifera]              131   7e-29
ref|XP_002879663.1| hypothetical protein ARALYDRAFT_321443 [Arab...   127   9e-28
emb|CBI32657.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|NP_181273.3| uncharacterized protein [Arabidopsis thaliana] ...   127   1e-27

>ref|XP_002275939.2| PREDICTED: uncharacterized protein LOC100244989 [Vitis vinifera]
          Length = 699

 Score =  131 bits (329), Expect = 7e-29
 Identities = 66/88 (75%), Positives = 76/88 (86%)
 Frame = -3

Query: 266 AVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKITVKRLE 87
           AV+KAVEVG  N LTRTVK  +DSVVQHAG AV+EGAKI+QDRIG RS +SF++TVKRLE
Sbjct: 7   AVSKAVEVGNKNNLTRTVKNYADSVVQHAGQAVAEGAKILQDRIGARSYRSFRLTVKRLE 66

Query: 86  ELSVSCRGLERIQLLRRWLVALKEIERL 3
           E +VSCRG ERIQLL+RWL  LKEIE+L
Sbjct: 67  EAAVSCRGPERIQLLKRWLAVLKEIEKL 94


>emb|CBI25305.3| unnamed protein product [Vitis vinifera]
          Length = 680

 Score =  131 bits (329), Expect = 7e-29
 Identities = 66/88 (75%), Positives = 76/88 (86%)
 Frame = -3

Query: 266 AVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKITVKRLE 87
           AV+KAVEVG  N LTRTVK  +DSVVQHAG AV+EGAKI+QDRIG RS +SF++TVKRLE
Sbjct: 7   AVSKAVEVGNKNNLTRTVKNYADSVVQHAGQAVAEGAKILQDRIGARSYRSFRLTVKRLE 66

Query: 86  ELSVSCRGLERIQLLRRWLVALKEIERL 3
           E +VSCRG ERIQLL+RWL  LKEIE+L
Sbjct: 67  EAAVSCRGPERIQLLKRWLAVLKEIEKL 94


>ref|XP_002879663.1| hypothetical protein ARALYDRAFT_321443 [Arabidopsis lyrata subsp.
           lyrata] gi|297325502|gb|EFH55922.1| hypothetical protein
           ARALYDRAFT_321443 [Arabidopsis lyrata subsp. lyrata]
          Length = 675

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/88 (73%), Positives = 76/88 (86%)
 Frame = -3

Query: 266 AVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKITVKRLE 87
           AVNKAVEVGG N +TRTV+  +DSVV  AG AVSEGAK+IQDRIG R+++SF + VKRLE
Sbjct: 7   AVNKAVEVGGKNNITRTVRNYADSVVLTAGNAVSEGAKLIQDRIGSRNVKSFSLAVKRLE 66

Query: 86  ELSVSCRGLERIQLLRRWLVALKEIERL 3
           E+SVS RG ER+QLLRRWLVALKEIER+
Sbjct: 67  EVSVSSRGGERVQLLRRWLVALKEIERM 94


>emb|CBI32657.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/88 (71%), Positives = 77/88 (87%)
 Frame = -3

Query: 266 AVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKITVKRLE 87
           A++KAVE GGN  L RTV+  +DSVVQ AG AV+EGAK++QDRIG ++I+SF+ TV+ LE
Sbjct: 7   AMHKAVEAGGNTNLPRTVRNYADSVVQQAGFAVAEGAKLLQDRIGMQNIKSFRHTVRNLE 66

Query: 86  ELSVSCRGLERIQLLRRWLVALKEIERL 3
           E+SVSCRGLERIQLLRRWLVALKEIER+
Sbjct: 67  EVSVSCRGLERIQLLRRWLVALKEIERI 94


>ref|NP_181273.3| uncharacterized protein [Arabidopsis thaliana]
           gi|330254295|gb|AEC09389.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 669

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/88 (72%), Positives = 76/88 (86%)
 Frame = -3

Query: 266 AVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKITVKRLE 87
           AVNKAVEVGG N +TRTV+  +DSVV  AG AVSEGAK+IQDRIG R+++SF + VKRLE
Sbjct: 7   AVNKAVEVGGKNNITRTVRNYADSVVLTAGNAVSEGAKLIQDRIGSRNVKSFSLAVKRLE 66

Query: 86  ELSVSCRGLERIQLLRRWLVALKEIERL 3
           E+SVS RG ER+QLLRRWLVAL+EIER+
Sbjct: 67  EVSVSSRGSERVQLLRRWLVALREIERM 94


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