BLASTX nr result
ID: Coptis24_contig00038633
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038633 (485 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK39859.1| unknown [Medicago truncatula] 182 3e-44 ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago... 182 3e-44 ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protei... 181 5e-44 ref|XP_002324647.1| predicted protein [Populus trichocarpa] gi|2... 177 6e-43 ref|XP_003527192.1| PREDICTED: thylakoid lumenal 16.5 kDa protei... 170 1e-40 >gb|AFK39859.1| unknown [Medicago truncatula] Length = 223 Score = 182 bits (461), Expect = 3e-44 Identities = 95/161 (59%), Positives = 121/161 (75%), Gaps = 1/161 (0%) Frame = +2 Query: 5 TKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXKLLEKVE-DKKKMIERQAVVSSST 181 TKR++ F T + LSL+GKG F +LLEKV+ D+KK +E+Q V+SSST Sbjct: 54 TKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDAELLEKVKKDRKKRLEKQGVISSST 113 Query: 182 TETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKIE 361 ET YLQ+LVYKLS+VGQA+++N L+ A SVLG ADW+QK N A +KLSSSPEEK E Sbjct: 114 KETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIALNKLSSSPEEKSE 173 Query: 362 VDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTTLS 484 VDTFNSSL +L+SSV +ND++SSKIAFVSS A+EKWT+L+ Sbjct: 174 VDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLT 214 >ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula] gi|355510412|gb|AES91554.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula] Length = 223 Score = 182 bits (461), Expect = 3e-44 Identities = 95/161 (59%), Positives = 121/161 (75%), Gaps = 1/161 (0%) Frame = +2 Query: 5 TKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXKLLEKVE-DKKKMIERQAVVSSST 181 TKR++ F T + LSL+GKG F +LLEKV+ D+KK +E+Q V+SSST Sbjct: 54 TKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDVELLEKVKKDRKKRLEKQGVISSST 113 Query: 182 TETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKIE 361 ET YLQ+LVYKLS+VGQA+++N L+ A SVLG ADW+QK N A +KLSSSPEEK E Sbjct: 114 KETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIALNKLSSSPEEKSE 173 Query: 362 VDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTTLS 484 VDTFNSSL +L+SSV +ND++SSKIAFVSS A+EKWT+L+ Sbjct: 174 VDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLT 214 >ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic isoform 1 [Vitis vinifera] gi|297738978|emb|CBI28223.3| unnamed protein product [Vitis vinifera] Length = 234 Score = 181 bits (459), Expect = 5e-44 Identities = 100/162 (61%), Positives = 118/162 (72%), Gaps = 2/162 (1%) Frame = +2 Query: 5 TKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXK-LLEKVE-DKKKMIERQAVVSSS 178 TKR+L T + SLAGKG++ + LLEKV+ D+KK IE+Q V+SSS Sbjct: 64 TKRSLSITLLTSLVFSLAGKGYYSDANAAILEADDDEELLEKVKKDRKKRIEKQGVISSS 123 Query: 179 TTETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKI 358 ET YLQELVYKLSKVGQA+ N LS A+S LG +T ADW+QK N AF+KLSSSPEEK Sbjct: 124 NKETGYLQELVYKLSKVGQAIDNNDLSAASSFLGSNTDADWVQKANIAFTKLSSSPEEKS 183 Query: 359 EVDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTTLS 484 EVD FNSSL +LISSV RND++SSKIAFVSS A EKWTTL+ Sbjct: 184 EVDAFNSSLASLISSVVRNDMESSKIAFVSSATAFEKWTTLT 225 >ref|XP_002324647.1| predicted protein [Populus trichocarpa] gi|222866081|gb|EEF03212.1| predicted protein [Populus trichocarpa] Length = 235 Score = 177 bits (450), Expect = 6e-43 Identities = 98/161 (60%), Positives = 116/161 (72%), Gaps = 1/161 (0%) Frame = +2 Query: 5 TKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXKLLEKVE-DKKKMIERQAVVSSST 181 TKR+L F T SLA +G +LLEKV+ D+KK +ERQ V+SS+ Sbjct: 66 TKRSLSICFLTSFVFSLASRGSSSSNAAILEADDDEELLEKVKRDRKKRLERQGVISSAN 125 Query: 182 TETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKIE 361 E YLQ+LVYKLSKVGQA+ N LS A+SVLG ST DW++K N AF+KLSSSPEEKIE Sbjct: 126 KEKGYLQDLVYKLSKVGQAIDNNDLSTASSVLGGSTDTDWVKKANIAFTKLSSSPEEKIE 185 Query: 362 VDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTTLS 484 VDTFNSSL++LISSVT NDI+SSK AFVSS A EKWTTL+ Sbjct: 186 VDTFNSSLSSLISSVTSNDIESSKTAFVSSATAFEKWTTLT 226 >ref|XP_003527192.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like isoform 1 [Glycine max] Length = 229 Score = 170 bits (430), Expect = 1e-40 Identities = 94/161 (58%), Positives = 117/161 (72%), Gaps = 1/161 (0%) Frame = +2 Query: 5 TKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXKLLEKVE-DKKKMIERQAVVSSST 181 TKR L +F T LSLA K +LLEKV+ D+KK +E+Q V+SSS Sbjct: 62 TKRGLSISFITSFVLSLASKK--NANAAILEADDDEELLEKVKRDRKKRLEKQGVISSSK 119 Query: 182 TETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKIE 361 ET YLQ+LVYKLS VGQAL++N LS A SVLG + ADW+Q+ N AF+KLSSSPEEK E Sbjct: 120 QETGYLQDLVYKLSTVGQALEKNDLSAAGSVLGGNADADWVQRANIAFNKLSSSPEEKTE 179 Query: 362 VDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTTLS 484 VD+FNSSL +LISSV++ND++SSKIAFVSS A EKWT+++ Sbjct: 180 VDSFNSSLASLISSVSKNDVESSKIAFVSSATAFEKWTSMT 220