BLASTX nr result
ID: Coptis24_contig00038564
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038564 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20609.3| unnamed protein product [Vitis vinifera] 66 3e-09 ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [V... 66 3e-09 emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera] 66 3e-09 ref|XP_002303218.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_004168028.1| PREDICTED: protein EARLY FLOWERING 3-like [C... 59 5e-07 >emb|CBI20609.3| unnamed protein product [Vitis vinifera] Length = 671 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 8/81 (9%) Frame = +3 Query: 3 LFELHRLMEVQRFIAGSPHLLLEDNFNL----CKASPAKKLPIDDGRISPPQAVKQKDEK 170 +FELHRL++VQR IAGSPHL+++++ L K+SPAKKLP++ PP V KD+ Sbjct: 319 VFELHRLIKVQRLIAGSPHLMVDESAYLGKPSLKSSPAKKLPLEYVVKPPPNMVMHKDDY 378 Query: 171 LRSAN----ATENVVGKPSTP 221 R+++ + EN VGK P Sbjct: 379 ERASHQLECSAENAVGKTHLP 399 >ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [Vitis vinifera] Length = 725 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 8/81 (9%) Frame = +3 Query: 3 LFELHRLMEVQRFIAGSPHLLLEDNFNL----CKASPAKKLPIDDGRISPPQAVKQKDEK 170 +FELHRL++VQR IAGSPHL+++++ L K+SPAKKLP++ PP V KD+ Sbjct: 373 VFELHRLIKVQRLIAGSPHLMVDESAYLGKPSLKSSPAKKLPLEYVVKPPPNMVMHKDDY 432 Query: 171 LRSAN----ATENVVGKPSTP 221 R+++ + EN VGK P Sbjct: 433 ERASHQLECSAENAVGKTHLP 453 >emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera] Length = 1138 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 8/81 (9%) Frame = +3 Query: 3 LFELHRLMEVQRFIAGSPHLLLEDNFNL----CKASPAKKLPIDDGRISPPQAVKQKDEK 170 +FELHRL++VQR IAGSPHL+++++ L K+SPAKKLP++ PP V KD+ Sbjct: 786 VFELHRLIKVQRLIAGSPHLMVDESAYLGKPSLKSSPAKKLPLEYVVKPPPNMVMHKDDY 845 Query: 171 LRSAN----ATENVVGKPSTP 221 R+++ + EN VGK P Sbjct: 846 ERASHQLECSAENAVGKTHLP 866 >ref|XP_002303218.1| predicted protein [Populus trichocarpa] gi|222840650|gb|EEE78197.1| predicted protein [Populus trichocarpa] Length = 765 Score = 59.7 bits (143), Expect = 2e-07 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 7/90 (7%) Frame = +3 Query: 3 LFELHRLMEVQRFIAGSPHLLLEDNFNL----CKASPAKKLPIDDGRISPPQAVKQKDEK 170 +FELHRL++VQ+ IAGSPHLLLEDN + K S K+P + P+ QK + Sbjct: 426 VFELHRLIKVQKLIAGSPHLLLEDNLYVGRASLKVSQINKVPSKCAMVDKPKDHSQK-QH 484 Query: 171 LRSANATENVVGK---PSTPDDFNEGIVTE 251 + A ENVVGK PST D+ ++ +++ Sbjct: 485 TSADFAGENVVGKLPLPSTNDETSKEPISQ 514 >ref|XP_004168028.1| PREDICTED: protein EARLY FLOWERING 3-like [Cucumis sativus] Length = 715 Score = 58.5 bits (140), Expect = 5e-07 Identities = 40/80 (50%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Frame = +3 Query: 3 LFELHRLMEVQRFIAGSPHLLLEDNFNLCKAS----PAKKLPIDDGRISPPQAVKQKDEK 170 +FELHRL++VQR IAGSPHLLLED L +S PAKKL D S Q D K Sbjct: 372 VFELHRLIKVQRLIAGSPHLLLEDGVFLDNSSPSPLPAKKLRSDYTVKSHVQLQPSDDPK 431 Query: 171 LRSAN---ATENVVGKPSTP 221 N + EN VGK S P Sbjct: 432 KPKHNVECSAENAVGKTSLP 451