BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038553
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU95128.1| PetD, partial (chloroplast) [Ploiarium sp. CCD-2012]   270   9e-71
ref|YP_001294301.1| cytochrome b6/f complex subunit IV [Illicium...   270   9e-71
gb|AFU95107.1| PetD, partial (chloroplast) [Balanops pachyphylla...   270   1e-70
gb|AFA26988.1| cytochrome b6/f complex subunit IV, partial [Noli...   270   1e-70
ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot ...   270   1e-70

>gb|AFU95128.1| PetD, partial (chloroplast) [Ploiarium sp. CCD-2012]
          Length = 164

 Score =  270 bits (690), Expect = 9e-71
 Identities = 134/137 (97%), Positives = 135/137 (98%)
 Frame = +2

Query: 2   AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 181
           AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT
Sbjct: 28  AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 87

Query: 182 VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 361
           VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP
Sbjct: 88  VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 147

Query: 362 IDKSLTLGLF*IDSALK 412
           IDKSLTLGLF IDS +K
Sbjct: 148 IDKSLTLGLFQIDSVVK 164


>ref|YP_001294301.1| cytochrome b6/f complex subunit IV [Illicium oligandrum]
           gi|147917425|gb|ABQ52549.1| cytochrome b6/f complex
           subunit IV [Illicium oligandrum]
          Length = 177

 Score =  270 bits (690), Expect = 9e-71
 Identities = 134/144 (93%), Positives = 137/144 (95%)
 Frame = +2

Query: 2   AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 181
           AWPNDLLYIFPVVILGTIACNVGLAVL+PSMIGEPADPFATPLEILPEWYFFPVFQILRT
Sbjct: 31  AWPNDLLYIFPVVILGTIACNVGLAVLDPSMIGEPADPFATPLEILPEWYFFPVFQILRT 90

Query: 182 VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 361
           VPNKLLGVLLMVSVP GLLTVPFLENVNKFQNPFRRPVATTVFL+GTAVALWLGIGATLP
Sbjct: 91  VPNKLLGVLLMVSVPTGLLTVPFLENVNKFQNPFRRPVATTVFLLGTAVALWLGIGATLP 150

Query: 362 IDKSLTLGLF*IDSALK*NTTTYV 433
           IDKSLTLGLF IDS +K    TYV
Sbjct: 151 IDKSLTLGLFQIDSTVKYQGITYV 174


>gb|AFU95107.1| PetD, partial (chloroplast) [Balanops pachyphylla]
           gi|408900699|gb|AFU95117.1| PetD, partial (chloroplast)
           [Galearia maingayi]
          Length = 164

 Score =  270 bits (689), Expect = 1e-70
 Identities = 134/137 (97%), Positives = 135/137 (98%)
 Frame = +2

Query: 2   AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 181
           AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT
Sbjct: 28  AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 87

Query: 182 VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 361
           VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP
Sbjct: 88  VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 147

Query: 362 IDKSLTLGLF*IDSALK 412
           IDKSLTLGLF IDS +K
Sbjct: 148 IDKSLTLGLFQIDSIVK 164


>gb|AFA26988.1| cytochrome b6/f complex subunit IV, partial [Nolina atopocarpa]
          Length = 165

 Score =  270 bits (689), Expect = 1e-70
 Identities = 134/137 (97%), Positives = 135/137 (98%)
 Frame = +2

Query: 2   AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 181
           AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT
Sbjct: 29  AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 88

Query: 182 VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 361
           VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP
Sbjct: 89  VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 148

Query: 362 IDKSLTLGLF*IDSALK 412
           IDKSLTLGLF IDS +K
Sbjct: 149 IDKSLTLGLFQIDSIVK 165


>ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot esculenta]
           gi|225544154|ref|YP_002720143.1| petD [Jatropha curcas]
           gi|326909423|ref|YP_004327693.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
           gi|157695916|gb|ABV66185.1| cytochrome b6/f complex
           subunit IV [Manihot esculenta]
           gi|224979595|gb|ACN72722.1| petD [Jatropha curcas]
           gi|290489368|gb|ADD31068.1| cytochrome b6/f complex
           subunit IV protein [Heuchera sanguinea]
           gi|290489370|gb|ADD31069.1| cytochrome b6/f complex
           subunit IV protein [Liquidambar styraciflua]
           gi|308523537|gb|ADO33587.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
          Length = 167

 Score =  270 bits (689), Expect = 1e-70
 Identities = 134/137 (97%), Positives = 135/137 (98%)
 Frame = +2

Query: 2   AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 181
           AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT
Sbjct: 31  AWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRT 90

Query: 182 VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 361
           VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP
Sbjct: 91  VPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLP 150

Query: 362 IDKSLTLGLF*IDSALK 412
           IDKSLTLGLF IDS +K
Sbjct: 151 IDKSLTLGLFQIDSIVK 167