BLASTX nr result

ID: Coptis24_contig00038550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038550
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520054.1| ATP binding protein, putative [Ricinus commu...    82   2e-17
ref|XP_002273880.1| PREDICTED: uncharacterized protein LOC100264...    87   1e-15
emb|CAC01845.1| hypothetical protein [Arabidopsis thaliana]            87   2e-15
ref|NP_197183.2| protein kinase family protein [Arabidopsis thal...    87   2e-15
ref|XP_002873795.1| ATP binding protein [Arabidopsis lyrata subs...    86   2e-15

>ref|XP_002520054.1| ATP binding protein, putative [Ricinus communis]
           gi|223540818|gb|EEF42378.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 423

 Score = 82.4 bits (202), Expect(2) = 2e-17
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = -2

Query: 163 VYYRLYEGIVGQGPYRGTRVIFKVYPGRRAGGTEADMMAANELNAHTSLQNDSR 2
           V  RLYEG + QGP++GT+VIFKVYPG+RAGG EADMMAANELN H  LQ+ S+
Sbjct: 107 VKIRLYEGRIAQGPFKGTQVIFKVYPGQRAGGFEADMMAANELNTHAVLQSSSK 160



 Score = 31.2 bits (69), Expect(2) = 2e-17
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -1

Query: 233 YSLSSQDMERLRVQDVGEGQVKISLLQ 153
           YSL   +M +L+ QDVGEG VKI L +
Sbjct: 87  YSLPGGNMGQLKFQDVGEGGVKIRLYE 113


>ref|XP_002273880.1| PREDICTED: uncharacterized protein LOC100264883 [Vitis vinifera]
           gi|297737299|emb|CBI26500.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/75 (61%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
 Frame = -2

Query: 205 D*EYKMLEKGRLR-------SVYYRLYEGIVGQGPYRGTRVIFKVYPGRRAGGTEADMMA 47
           D EY   + GRLR       +V  RLYEGI+ QGP RGT VIFKVYPG+RA G EADMMA
Sbjct: 76  DVEYSSEDMGRLRVQDVGEGNVKIRLYEGIITQGPLRGTPVIFKVYPGQRAAGIEADMMA 135

Query: 46  ANELNAHTSLQNDSR 2
           ANELNAH  LQ++++
Sbjct: 136 ANELNAHAFLQSNAK 150


>emb|CAC01845.1| hypothetical protein [Arabidopsis thaliana]
          Length = 351

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 7/75 (9%)
 Frame = -2

Query: 208 ND*EYKMLEKGRLRS-------VYYRLYEGIVGQGPYRGTRVIFKVYPGRRAGGTEADMM 50
           +D EY   + GRL+S       V  RLY+G + QGP+RGT V+FKVYPG+RAGG EADMM
Sbjct: 107 SDFEYTSDDIGRLKSQDIGEGAVKIRLYQGRISQGPFRGTPVVFKVYPGQRAGGVEADMM 166

Query: 49  AANELNAHTSLQNDS 5
           AANELNAH+ LQ+ S
Sbjct: 167 AANELNAHSFLQSKS 181


>ref|NP_197183.2| protein kinase family protein [Arabidopsis thaliana]
           gi|26452850|dbj|BAC43504.1| unknown protein [Arabidopsis
           thaliana] gi|29824123|gb|AAP04022.1| unknown protein
           [Arabidopsis thaliana] gi|332004959|gb|AED92342.1|
           protein kinase family protein [Arabidopsis thaliana]
          Length = 418

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 7/75 (9%)
 Frame = -2

Query: 208 ND*EYKMLEKGRLRS-------VYYRLYEGIVGQGPYRGTRVIFKVYPGRRAGGTEADMM 50
           +D EY   + GRL+S       V  RLY+G + QGP+RGT V+FKVYPG+RAGG EADMM
Sbjct: 84  SDFEYTSDDIGRLKSQDIGEGAVKIRLYQGRISQGPFRGTPVVFKVYPGQRAGGVEADMM 143

Query: 49  AANELNAHTSLQNDS 5
           AANELNAH+ LQ+ S
Sbjct: 144 AANELNAHSFLQSKS 158


>ref|XP_002873795.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319632|gb|EFH50054.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
 Frame = -2

Query: 208 ND*EYKMLEKGRLRS-------VYYRLYEGIVGQGPYRGTRVIFKVYPGRRAGGTEADMM 50
           +D EY   + GRL+S       V  RLYEG + QGP+RGT ++FKVYPG+RAGG EADMM
Sbjct: 84  SDFEYTSDDIGRLKSQDIGEGGVKIRLYEGRISQGPFRGTPIVFKVYPGQRAGGVEADMM 143

Query: 49  AANELNAHTSLQN 11
           AANELNAH+ LQ+
Sbjct: 144 AANELNAHSFLQS 156


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