BLASTX nr result

ID: Coptis24_contig00038539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038539
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001783751.1| ATP-binding cassette transporter, subfamily ...    81   1e-13
ref|XP_002278313.2| PREDICTED: ABC transporter G family member 2...    79   5e-13
emb|CBI36070.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002972170.1| ATP-binding cassette transporter [Selaginell...    78   9e-13
ref|XP_002972166.1| ATP-binding cassette transporter [Selaginell...    78   9e-13

>ref|XP_001783751.1| ATP-binding cassette transporter, subfamily G, member 22, group PDR
           protein PpABCG22 [Physcomitrella patens subsp. patens]
           gi|162664757|gb|EDQ51465.1| ATP-binding cassette
           transporter, subfamily G, member 22, group PDR protein
           PpABCG22 [Physcomitrella patens subsp. patens]
          Length = 1417

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/87 (40%), Positives = 58/87 (66%)
 Frame = -3

Query: 263 SIFSTSESTRRYNEDEEDLKWAAIEKLPTYDRTTVSLLKSNLSTSGKFLHEHIDVRRLDF 84
           ++FS S + R+  +DEE LKWAA++KLPTYDR   +++K+ +   GK     +DVR L +
Sbjct: 16  NVFSRSSTQRKEEDDEESLKWAALQKLPTYDRMRTAIMKT-IDADGKTSQAEVDVRNLSY 74

Query: 83  QTRQELVNRLVHIVHNDNGLFVQKLRE 3
           + RQ+++++L+ +   DN  F+ K RE
Sbjct: 75  EDRQQIISKLLRVTEEDNERFLLKFRE 101


>ref|XP_002278313.2| PREDICTED: ABC transporter G family member 29-like [Vitis vinifera]
          Length = 1438

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 7/92 (7%)
 Frame = -3

Query: 260 IFSTSESTRRYN--EDEEDLKWAAIEKLPTYDRTTVSLLKS-----NLSTSGKFLHEHID 102
           +FS S  +RR N  +DEE L+WAA+EKLPTYDR   S++KS     + +   + +H+ +D
Sbjct: 26  VFSASRRSRRSNLDDDEEALRWAALEKLPTYDRLRTSIIKSFEDNDHNNQGNRVVHKEVD 85

Query: 101 VRRLDFQTRQELVNRLVHIVHNDNGLFVQKLR 6
           VR+LD   RQ  ++RL  +   DN  F++K R
Sbjct: 86  VRKLDINDRQNFIDRLFKVAEEDNEKFLKKFR 117


>emb|CBI36070.3| unnamed protein product [Vitis vinifera]
          Length = 1493

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 7/92 (7%)
 Frame = -3

Query: 260 IFSTSESTRRYN--EDEEDLKWAAIEKLPTYDRTTVSLLKS-----NLSTSGKFLHEHID 102
           +FS S  +RR N  +DEE L+WAA+EKLPTYDR   S++KS     + +   + +H+ +D
Sbjct: 26  VFSASRRSRRSNLDDDEEALRWAALEKLPTYDRLRTSIIKSFEDNDHNNQGNRVVHKEVD 85

Query: 101 VRRLDFQTRQELVNRLVHIVHNDNGLFVQKLR 6
           VR+LD   RQ  ++RL  +   DN  F++K R
Sbjct: 86  VRKLDINDRQNFIDRLFKVAEEDNEKFLKKFR 117


>ref|XP_002972170.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300160469|gb|EFJ27087.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1781

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = -3

Query: 248 SESTRRYNEDEEDLKWAAIEKLPTYDRTTVSLLKSNLSTSGKFLHEHIDVRRLDFQTRQE 69
           S S+ R  +DEE LKWAA+EKLPTYDR   +++K N+   G   HEHIDV+ L    R+ 
Sbjct: 24  SRSSVREVDDEEALKWAALEKLPTYDRLRTAIIK-NVGEHGSTRHEHIDVKSLGLTERRN 82

Query: 68  LVNRLVHIVHNDNGLFVQKLRE 3
           LV +L+     +N +F++KLRE
Sbjct: 83  LVEKLLATTDTENEMFIRKLRE 104


>ref|XP_002972166.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300160465|gb|EFJ27083.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1687

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = -3

Query: 248 SESTRRYNEDEEDLKWAAIEKLPTYDRTTVSLLKSNLSTSGKFLHEHIDVRRLDFQTRQE 69
           S S+ R  +DEE LKWAA+EKLPTYDR   +++K N+   G   HEHIDV+ L    R+ 
Sbjct: 24  SRSSVREVDDEEALKWAALEKLPTYDRLRTAIIK-NVGEHGSTRHEHIDVKSLGLTERRN 82

Query: 68  LVNRLVHIVHNDNGLFVQKLRE 3
           LV +L+     +N +F++KLRE
Sbjct: 83  LVEKLLATTDTENEMFIRKLRE 104


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