BLASTX nr result

ID: Coptis24_contig00038538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038538
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309524.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_003550294.1| PREDICTED: uncharacterized protein LOC100789...   193   1e-47
ref|XP_003550958.1| PREDICTED: transcription factor RAX3-like [G...   192   3e-47
gb|ABR16159.1| unknown [Picea sitchensis]                             192   3e-47
ref|XP_003556962.1| PREDICTED: transcription factor RAX3-like [G...   191   4e-47

>ref|XP_002309524.1| predicted protein [Populus trichocarpa] gi|222855500|gb|EEE93047.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  194 bits (492), Expect = 8e-48
 Identities = 83/98 (84%), Positives = 92/98 (93%)
 Frame = +2

Query: 2   RGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPDIKHGGFTE 181
           RGPWSPEED  LK+Y+E HGTGGNWI+LPQKAGLKRCGKSCRLRWLNYLRPDIKHGGFTE
Sbjct: 14  RGPWSPEEDATLKSYLETHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPDIKHGGFTE 73

Query: 182 EEDNVICSLYKNIGSRWSVIASQLQGRTDNDIKNYWNT 295
           EEDN+IC+LY  +GSRWS+IA+QL GRTDND+KNYWNT
Sbjct: 74  EEDNIICTLYSQMGSRWSLIAAQLPGRTDNDVKNYWNT 111


>ref|XP_003550294.1| PREDICTED: uncharacterized protein LOC100789985 [Glycine max]
          Length = 309

 Score =  193 bits (490), Expect = 1e-47
 Identities = 83/98 (84%), Positives = 91/98 (92%)
 Frame = +2

Query: 2   RGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPDIKHGGFTE 181
           RGPWSPEED  LKNYVE HGTGGNWI+LP+KAGL+RCGKSCRLRWLNYLRPDIKHGGFTE
Sbjct: 14  RGPWSPEEDATLKNYVETHGTGGNWIALPKKAGLRRCGKSCRLRWLNYLRPDIKHGGFTE 73

Query: 182 EEDNVICSLYKNIGSRWSVIASQLQGRTDNDIKNYWNT 295
           EEDN+IC+LY  +GSRWS IAS+L GRTDND+KNYWNT
Sbjct: 74  EEDNIICTLYAQMGSRWSAIASKLPGRTDNDVKNYWNT 111


>ref|XP_003550958.1| PREDICTED: transcription factor RAX3-like [Glycine max]
          Length = 339

 Score =  192 bits (487), Expect = 3e-47
 Identities = 83/98 (84%), Positives = 91/98 (92%)
 Frame = +2

Query: 2   RGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPDIKHGGFTE 181
           RGPWSPEED  LK+Y+E HGTGGNWI+LPQK GLKRCGKSCRLRWLNYLRP+IKHGGF+E
Sbjct: 14  RGPWSPEEDTKLKSYIEEHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSE 73

Query: 182 EEDNVICSLYKNIGSRWSVIASQLQGRTDNDIKNYWNT 295
           EEDN+ICSLY  IGSRWS+IA+QL GRTDNDIKNYWNT
Sbjct: 74  EEDNIICSLYVTIGSRWSIIAAQLPGRTDNDIKNYWNT 111


>gb|ABR16159.1| unknown [Picea sitchensis]
          Length = 415

 Score =  192 bits (487), Expect = 3e-47
 Identities = 83/98 (84%), Positives = 93/98 (94%)
 Frame = +2

Query: 2   RGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPDIKHGGFTE 181
           RGPWSPEED  LKN+VE+HGTGGNWI+LP+KAGLKRCGKSCRLRWLNYLRPDIKHG F+E
Sbjct: 14  RGPWSPEEDTILKNFVEKHGTGGNWIALPRKAGLKRCGKSCRLRWLNYLRPDIKHGDFSE 73

Query: 182 EEDNVICSLYKNIGSRWSVIASQLQGRTDNDIKNYWNT 295
           EED++ICSLY +IGSRWS+IA+QL GRTDNDIKNYWNT
Sbjct: 74  EEDSIICSLYTSIGSRWSIIAAQLPGRTDNDIKNYWNT 111


>ref|XP_003556962.1| PREDICTED: transcription factor RAX3-like [Glycine max]
          Length = 369

 Score =  191 bits (486), Expect = 4e-47
 Identities = 82/98 (83%), Positives = 93/98 (94%)
 Frame = +2

Query: 2   RGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPDIKHGGFTE 181
           +GPWSPEED  LK+Y+E+HGTGGNWI+LPQK GLKRCGKSCRLRWLNYLRP++KHGGF+E
Sbjct: 14  KGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSE 73

Query: 182 EEDNVICSLYKNIGSRWSVIASQLQGRTDNDIKNYWNT 295
           EEDN+ICSLY +IGSRWSVIA+QL GRTDNDIKNYWNT
Sbjct: 74  EEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNT 111


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