BLASTX nr result

ID: Coptis24_contig00038529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038529
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glyc...   154   5e-36
emb|CBI16271.3| unnamed protein product [Vitis vinifera]              149   2e-34
emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]   147   7e-34
dbj|BAJ96468.1| predicted protein [Hordeum vulgare subsp. vulgare]    147   1e-33
ref|XP_002526352.1| conserved hypothetical protein [Ricinus comm...   145   3e-33

>ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glycine max]
          Length = 388

 Score =  154 bits (390), Expect = 5e-36
 Identities = 88/167 (52%), Positives = 109/167 (65%), Gaps = 7/167 (4%)
 Frame = -3

Query: 483 EMALIESAFLFASNK-YSSLSIHSNSKWR------TLSTCSSRRKEEDIEDIGTXXXXXX 325
           EMALIE+AF FAS + +SSL   S+SK        +++  S R+   DIED+ T      
Sbjct: 23  EMALIEAAFAFASTRTFSSLRSSSSSKLPLCTNALSITPLSKRKLSSDIEDLPTCKKKHT 82

Query: 324 XXXXXXXXSLLDRFRRKRALSVTDIVASEWCEKKMEYGLTRGKPKATDAMKAGTDRHAKL 145
                     L RFR KR LSVTD+ ++EWC K+ME+ L  G  K  +AM+AG  RHAKL
Sbjct: 83  LSDS-----FLHRFRNKRGLSVTDLTSTEWCPKQMEFSLLLGGRKVNEAMRAGIARHAKL 137

Query: 144 EQEVIQKVEVHVEEIEDSWALKIINFIVGANQLLFQGLTRELPLFGF 4
           EQEVIQ+VEV V+  ED WALK +NFI GANQLLF+GLTRELP+ GF
Sbjct: 138 EQEVIQRVEVKVKSQEDYWALKFLNFIAGANQLLFEGLTRELPVIGF 184


>emb|CBI16271.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  149 bits (377), Expect = 2e-34
 Identities = 89/165 (53%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
 Frame = -3

Query: 483 EMALIESAFLFASNKYSSLSIHSNS----KWRTLSTCSSRRKEEDIEDIGTXXXXXXXXX 316
           EMALIE+A   A +  SS +I + S       +LS C+      DIED G          
Sbjct: 24  EMALIEAALTAARSSLSSSTIPAISFTAAASSSLSDCTDTSPIRDIEDSGVLRSTQKKIG 83

Query: 315 XXXXXSLLDRFRRKRALSVTDIVASEWCEKKMEYGLTRGKPKATDAMKAGTDRHAKLEQE 136
                 LL RFRRK+ LSVTDI  +EWCEK+ME+ L   KP+ T AMKAG  RHAKLE+E
Sbjct: 84  VRES--LLHRFRRKKGLSVTDITGTEWCEKQMEFLLLLRKPEITKAMKAGIVRHAKLEEE 141

Query: 135 VIQKVEVHVEEIEDSWALKIINFIVGANQLLFQGLTRELPLFGFV 1
           V++KV+V V  +ED  ALK INFIVGANQLLF+GLTRELPL GFV
Sbjct: 142 VVKKVKVRVGTLEDVLALKFINFIVGANQLLFEGLTRELPLIGFV 186


>emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]
          Length = 402

 Score =  147 bits (372), Expect = 7e-34
 Identities = 92/188 (48%), Positives = 109/188 (57%), Gaps = 27/188 (14%)
 Frame = -3

Query: 483 EMALIESAFLFASNKYSSLSI------------------HSNSKW---------RTLSTC 385
           EMALIE+A   A +  SS +I                  H N++          R LS C
Sbjct: 24  EMALIEAALTAARSSLSSSTIPAXSFTAAASSSSFSPLLHRNARSIGSIARLSKRRLSXC 83

Query: 384 SSRRKEEDIEDIGTXXXXXXXXXXXXXXSLLDRFRRKRALSVTDIVASEWCEKKMEYGLT 205
           +      DIED G                LL RFRRK+ LSVTDI  +EWCEK+ME+ L 
Sbjct: 84  TDTSPIRDIEDSGVLRSTQKKIGVRES--LLHRFRRKKGLSVTDITGTEWCEKQMEFLLL 141

Query: 204 RGKPKATDAMKAGTDRHAKLEQEVIQKVEVHVEEIEDSWALKIINFIVGANQLLFQGLTR 25
            GKP+ T AMKAG  RHAKLE+EV++KV+V V  +ED  ALK INFIVGANQLLF+GLTR
Sbjct: 142 LGKPEITKAMKAGIVRHAKLEEEVVKKVKVRVGTLEDVLALKFINFIVGANQLLFEGLTR 201

Query: 24  ELPLFGFV 1
           ELPL GFV
Sbjct: 202 ELPLIGFV 209


>dbj|BAJ96468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score =  147 bits (370), Expect = 1e-33
 Identities = 81/161 (50%), Positives = 107/161 (66%)
 Frame = -3

Query: 483 EMALIESAFLFASNKYSSLSIHSNSKWRTLSTCSSRRKEEDIEDIGTXXXXXXXXXXXXX 304
           EMA+IE+A   A+     LS  +     TLS C++     DIED                
Sbjct: 11  EMAMIEAALAAATAARPLLSAAAVRGAATLS-CAAFPPAGDIEDSAPPPRRS-------- 61

Query: 303 XSLLDRFRRKRALSVTDIVASEWCEKKMEYGLTRGKPKATDAMKAGTDRHAKLEQEVIQK 124
             LL RFR +RAL+VTDI A+EWC+K+ME+ L  GKP+ T+AMKAG+DRHA+LEQEVI++
Sbjct: 62  --LLSRFRERRALAVTDITATEWCDKQMEFVLEHGKPERTEAMKAGSDRHAQLEQEVIER 119

Query: 123 VEVHVEEIEDSWALKIINFIVGANQLLFQGLTRELPLFGFV 1
           V++ V   E+SWA+K +NFIVG+NQLLF G+TRELP+ G V
Sbjct: 120 VDIAVRSAEESWAVKFMNFIVGSNQLLFNGMTRELPVIGIV 160


>ref|XP_002526352.1| conserved hypothetical protein [Ricinus communis]
           gi|223534311|gb|EEF36023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score =  145 bits (367), Expect = 3e-33
 Identities = 82/175 (46%), Positives = 109/175 (62%), Gaps = 14/175 (8%)
 Frame = -3

Query: 483 EMALIESAFLFASNKYSSLSIHS----------NSKWRTLSTCSSRRKEE----DIEDIG 346
           EM  IE+A       +SS SI +           +  R++ T +S  K+     DIED+G
Sbjct: 35  EMGFIEAALAATRPCFSSSSIPAICSPSRSSLFQNSVRSIQTITSFSKKRLIGSDIEDLG 94

Query: 345 TXXXXXXXXXXXXXXSLLDRFRRKRALSVTDIVASEWCEKKMEYGLTRGKPKATDAMKAG 166
                          S L +FR++  LSVTDI ++EWCEK+ME+ L  GK K + AMKAG
Sbjct: 95  DFKSTQLKKNRVADQSFLYKFRKRTGLSVTDITSTEWCEKQMEFVLLFGKRKMSKAMKAG 154

Query: 165 TDRHAKLEQEVIQKVEVHVEEIEDSWALKIINFIVGANQLLFQGLTRELPLFGFV 1
            DRH KLE+EV++KV+V +E +ED+WALK +NFI GANQLLF+GLTRELPL GF+
Sbjct: 155 RDRHVKLEKEVVKKVKVSIESVEDAWALKFLNFITGANQLLFEGLTRELPLVGFL 209


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