BLASTX nr result

ID: Coptis24_contig00038521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038521
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36690.1| GATA domain class transcription factor [Malus x d...   104   6e-21
ref|XP_004162986.1| PREDICTED: GATA transcription factor 12-like...   104   8e-21
ref|XP_004148425.1| PREDICTED: GATA transcription factor 12-like...   104   8e-21
emb|CBI36080.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   100   2e-19

>gb|ADL36690.1| GATA domain class transcription factor [Malus x domestica]
          Length = 375

 Score =  104 bits (260), Expect = 6e-21
 Identities = 58/93 (62%), Positives = 66/93 (70%), Gaps = 17/93 (18%)
 Frame = -2

Query: 230 SDELCVPYDDIAELEWLSNFVEESFSSEDMQKLQLISGIKPE----ISETHESQP----- 78
           S +LCVP DD+AELEWLSNFVEESFSSED+QKLQLISG+KP       ET + QP     
Sbjct: 106 SSDLCVPCDDLAELEWLSNFVEESFSSEDLQKLQLISGMKPRPDQAAFETRQFQPDPTRT 165

Query: 77  --------NPIFRPAEMSVPGKARTKRSRSAPC 3
                   NPIF P E+SVP KAR+KRSR+APC
Sbjct: 166 NNNPNGNNNPIFNP-EVSVPAKARSKRSRAAPC 197


>ref|XP_004162986.1| PREDICTED: GATA transcription factor 12-like [Cucumis sativus]
          Length = 338

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 8/86 (9%)
 Frame = -2

Query: 239 SQLSDELCVPYDDIAELEWLSNFVEESFSSEDMQKLQLISGIKPEISETHESQPNP---- 72
           +  S ELCVPYDD+AELEWLSNFVEESFSSEDMQKL+LISG+K +  E     P P    
Sbjct: 84  AHFSSELCVPYDDLAELEWLSNFVEESFSSEDMQKLELISGVKVKSDEPPTQSPQPTATR 143

Query: 71  ----IFRPAEMSVPGKARTKRSRSAP 6
               IF+P  +SVP KAR+KRSR+ P
Sbjct: 144 SAAAIFKPEIVSVPAKARSKRSRALP 169


>ref|XP_004148425.1| PREDICTED: GATA transcription factor 12-like [Cucumis sativus]
          Length = 336

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 8/86 (9%)
 Frame = -2

Query: 239 SQLSDELCVPYDDIAELEWLSNFVEESFSSEDMQKLQLISGIKPEISETHESQPNP---- 72
           +  S ELCVPYDD+AELEWLSNFVEESFSSEDMQKL+LISG+K +  E     P P    
Sbjct: 82  AHFSSELCVPYDDLAELEWLSNFVEESFSSEDMQKLELISGVKVKSDEPPTQSPQPTATR 141

Query: 71  ----IFRPAEMSVPGKARTKRSRSAP 6
               IF+P  +SVP KAR+KRSR+ P
Sbjct: 142 SAAAIFKPEIVSVPAKARSKRSRALP 167


>emb|CBI36080.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
 Frame = -2

Query: 254 NFPDSSQLSDELCVPYDDIAELEWLSNFVEESFSSEDMQKLQLISGIKPEISETHESQP- 78
           NF D+ Q S ELCVP D++AELEWLSNFVEESFSSED+ K+Q++SGIK  +  T   +P 
Sbjct: 44  NFTDA-QFSGELCVPCDELAELEWLSNFVEESFSSEDLHKIQVLSGIKAPLHTTESPEPQ 102

Query: 77  --------NPIFRPAEMSVPGKARTKRSRSAPC 3
                    PI +P  M+VPGKAR+KR RS PC
Sbjct: 103 FQPETARSEPILQP-PMNVPGKARSKRPRSVPC 134


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
 Frame = -2

Query: 254 NFPDSSQLSDELCVPYDDIAELEWLSNFVEESFSSEDMQKLQLISGIKPEISETHESQP- 78
           NF D+ Q S ELCVP D++AELEWLSNFVEESFSSED+ K+Q++SGIK  +  T   +P 
Sbjct: 90  NFTDA-QFSGELCVPCDELAELEWLSNFVEESFSSEDLHKIQVLSGIKAPLHTTESPEPQ 148

Query: 77  --------NPIFRPAEMSVPGKARTKRSRSAPC 3
                    PI +P  M+VPGKAR+KR RS PC
Sbjct: 149 FQPETARSEPILQP-PMNVPGKARSKRPRSVPC 180


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