BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038517
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   207   9e-52
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   207   9e-52
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   194   8e-48
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   190   9e-47

>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/109 (87%), Positives = 103/109 (94%)
 Frame = +2

Query: 2    EIYAKLDELSDPLDKAGYVPMVETDLHDVEESEKQMLLYQHSEKLAVAFGLIATPAGTPI 181
            EIYAKLDELSD +DKAGYVPMVE DLHDVE+SEK++LLY HSEKLAVAFGLIATP G PI
Sbjct: 825  EIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPI 884

Query: 182  RVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDGACSCGDYW 328
            RVKKNLRVCVDCHT FK++CKIVSREIIVRDINRFHHF+DG+CSCGDYW
Sbjct: 885  RVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/109 (87%), Positives = 103/109 (94%)
 Frame = +2

Query: 2    EIYAKLDELSDPLDKAGYVPMVETDLHDVEESEKQMLLYQHSEKLAVAFGLIATPAGTPI 181
            EIYAKLDELSD +DKAGYVPMVE DLHDVE+SEK++LLY HSEKLAVAFGLIATP G PI
Sbjct: 798  EIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPI 857

Query: 182  RVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDGACSCGDYW 328
            RVKKNLRVCVDCHT FK++CKIVSREIIVRDINRFHHF+DG+CSCGDYW
Sbjct: 858  RVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906


>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 858

 Score =  194 bits (492), Expect = 8e-48
 Identities = 89/109 (81%), Positives = 99/109 (90%)
 Frame = +2

Query: 2    EIYAKLDELSDPLDKAGYVPMVETDLHDVEESEKQMLLYQHSEKLAVAFGLIATPAGTPI 181
            EIYAKLD+L D L KAGY  +VE D+H+V++SEK+ LLY HSEKLAVAFGLIATP G PI
Sbjct: 750  EIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPI 809

Query: 182  RVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDGACSCGDYW 328
            RVKKNLR+CVDCHTFFKFVCKIVSREIIVRDINRFHHF+DG+CSCGDYW
Sbjct: 810  RVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858


>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
            predicted protein [Populus trichocarpa]
          Length = 786

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/109 (82%), Positives = 96/109 (88%)
 Frame = +2

Query: 2    EIYAKLDELSDPLDKAGYVPMVETDLHDVEESEKQMLLYQHSEKLAVAFGLIATPAGTPI 181
            EIYAKLDELSD L KAGYVPMVE DLHDVE SEK+ LLY HSEKLAVAFGLIATP G PI
Sbjct: 678  EIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPI 737

Query: 182  RVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDGACSCGDYW 328
            RVKKNLR+C DCHT  KF+ KIVSREIIVRD NRFHHFR+G+CSCG+YW
Sbjct: 738  RVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  190 bits (483), Expect = 9e-47
 Identities = 86/109 (78%), Positives = 96/109 (88%)
 Frame = +2

Query: 2    EIYAKLDELSDPLDKAGYVPMVETDLHDVEESEKQMLLYQHSEKLAVAFGLIATPAGTPI 181
            EIY KLD+L + L  AGYVPM+ETDLHDVE+ EK+ LL+ HSEKLAVAFGLIATP G PI
Sbjct: 755  EIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPI 814

Query: 182  RVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDGACSCGDYW 328
            RVKKNLRVC+DCHT FKF+ K+ SREIIVRDINRFHHFRDG+CSCGDYW
Sbjct: 815  RVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863