BLASTX nr result

ID: Coptis24_contig00038462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038462
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511176.1| acetolactate synthase, putative [Ricinus com...   162   2e-38
ref|XP_002322262.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
emb|CCN25570.1| Acetolactate synthase / acetohydroxyacid synthas...   162   3e-38
gb|AEE68995.1| acetolactate synthase D376E, partial [Conyza cana...   162   3e-38
gb|ADN95986.1| acetolactate synthase, partial [Conyza canadensis]     162   3e-38

>ref|XP_002511176.1| acetolactate synthase, putative [Ricinus communis]
           gi|223550291|gb|EEF51778.1| acetolactate synthase,
           putative [Ricinus communis]
          Length = 660

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/86 (91%), Positives = 85/86 (98%)
 Frame = -1

Query: 258 GYARASGKTGVCIATSGPGATNLVSGLADAMLDSIPIVAITGQVPRRMIGTDAFQETPIV 79
           GYAR+SGK GVCIATSGPGATNLVSGLADA+LDS+PIVAITGQVPRRMIGTDAFQETPIV
Sbjct: 143 GYARSSGKPGVCIATSGPGATNLVSGLADALLDSVPIVAITGQVPRRMIGTDAFQETPIV 202

Query: 78  EVTRSITKHNYLVLDIDDLPRIVREA 1
           EVTRSITKHNYLVLD+DD+PRIV+EA
Sbjct: 203 EVTRSITKHNYLVLDVDDIPRIVQEA 228


>ref|XP_002322262.1| predicted protein [Populus trichocarpa] gi|222869258|gb|EEF06389.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/86 (93%), Positives = 84/86 (97%)
 Frame = -1

Query: 258 GYARASGKTGVCIATSGPGATNLVSGLADAMLDSIPIVAITGQVPRRMIGTDAFQETPIV 79
           GYARASG  GVCIATSGPGATNLVSGLADA+LDS+PIVAITGQVPRRMIGTDAFQETPIV
Sbjct: 133 GYARASGLPGVCIATSGPGATNLVSGLADALLDSVPIVAITGQVPRRMIGTDAFQETPIV 192

Query: 78  EVTRSITKHNYLVLDIDDLPRIVREA 1
           EVTRSITKHNYLVLD+DD+PRIVREA
Sbjct: 193 EVTRSITKHNYLVLDVDDIPRIVREA 218


>emb|CCN25570.1| Acetolactate synthase / acetohydroxyacid synthase, partial
           [Stellaria media]
          Length = 471

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/86 (90%), Positives = 85/86 (98%)
 Frame = -1

Query: 258 GYARASGKTGVCIATSGPGATNLVSGLADAMLDSIPIVAITGQVPRRMIGTDAFQETPIV 79
           GYARA+G+ GVCIATSGPGATNLVSGLADA+LDS+PIVAITGQVPRRMIGTDAFQETPIV
Sbjct: 21  GYARATGRVGVCIATSGPGATNLVSGLADALLDSVPIVAITGQVPRRMIGTDAFQETPIV 80

Query: 78  EVTRSITKHNYLVLDIDDLPRIVREA 1
           EVTRSITKHNYLVLD+DD+PRIV+EA
Sbjct: 81  EVTRSITKHNYLVLDVDDIPRIVKEA 106


>gb|AEE68995.1| acetolactate synthase D376E, partial [Conyza canadensis]
          Length = 557

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = -1

Query: 258 GYARASGKTGVCIATSGPGATNLVSGLADAMLDSIPIVAITGQVPRRMIGTDAFQETPIV 79
           GYARASG  GVCIATSGPGATNLVSGLADA+LDS+P+VAITGQVPRRMIGTDAFQETPIV
Sbjct: 46  GYARASGLPGVCIATSGPGATNLVSGLADALLDSVPVVAITGQVPRRMIGTDAFQETPIV 105

Query: 78  EVTRSITKHNYLVLDIDDLPRIVREA 1
           EVTRSITKHNYLVLD+DD+PRIVREA
Sbjct: 106 EVTRSITKHNYLVLDVDDIPRIVREA 131


>gb|ADN95986.1| acetolactate synthase, partial [Conyza canadensis]
          Length = 605

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = -1

Query: 258 GYARASGKTGVCIATSGPGATNLVSGLADAMLDSIPIVAITGQVPRRMIGTDAFQETPIV 79
           GYARASG  GVCIATSGPGATNLVSGLADA+LDS+P+VAITGQVPRRMIGTDAFQETPIV
Sbjct: 88  GYARASGLPGVCIATSGPGATNLVSGLADALLDSVPVVAITGQVPRRMIGTDAFQETPIV 147

Query: 78  EVTRSITKHNYLVLDIDDLPRIVREA 1
           EVTRSITKHNYLVLD+DD+PRIVREA
Sbjct: 148 EVTRSITKHNYLVLDVDDIPRIVREA 173


Top