BLASTX nr result

ID: Coptis24_contig00038439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038439
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265131.1| PREDICTED: uncharacterized protein LOC100268...   109   3e-22
ref|XP_003524967.1| PREDICTED: uncharacterized protein LOC100792...   100   1e-19
ref|XP_004136166.1| PREDICTED: uncharacterized protein LOC101222...    97   2e-18
ref|XP_004160572.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    96   3e-18
ref|NP_566649.1| uncharacterized protein [Arabidopsis thaliana] ...    95   5e-18

>ref|XP_002265131.1| PREDICTED: uncharacterized protein LOC100268166 [Vitis vinifera]
           gi|297743783|emb|CBI36666.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/76 (69%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
 Frame = -2

Query: 230 VCRKKGKLRLDGIVKTVLSLGCNRCGEPAAECVFSNFTLLLTEEAIEEGDVINMGVIFGE 51
           V RKK KLRLDG+++TV++LGCNRCGEPAAEC+FSNF+LLLTEE IEE +VINMGVIFGE
Sbjct: 162 VTRKKHKLRLDGLLRTVITLGCNRCGEPAAECIFSNFSLLLTEEPIEEQEVINMGVIFGE 221

Query: 50  SKK-NTYNGTGEDEDE 6
             K  T   + E++DE
Sbjct: 222 DDKLKTSTESSEEDDE 237


>ref|XP_003524967.1| PREDICTED: uncharacterized protein LOC100792185 [Glycine max]
          Length = 318

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/76 (63%), Positives = 60/76 (78%)
 Frame = -2

Query: 230 VCRKKGKLRLDGIVKTVLSLGCNRCGEPAAECVFSNFTLLLTEEAIEEGDVINMGVIFGE 51
           V RKK KLRLDGI+KTV++L CNRC  P+AE +FS F+LLLT+E IEE + I+MGVIFGE
Sbjct: 161 VTRKKKKLRLDGIIKTVITLLCNRCCAPSAESIFSEFSLLLTDEPIEEPETIDMGVIFGE 220

Query: 50  SKKNTYNGTGEDEDED 3
            K  T   +GED+D+D
Sbjct: 221 DKLTTSGNSGEDDDDD 236


>ref|XP_004136166.1| PREDICTED: uncharacterized protein LOC101222143 [Cucumis sativus]
          Length = 319

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/76 (59%), Positives = 58/76 (76%)
 Frame = -2

Query: 230 VCRKKGKLRLDGIVKTVLSLGCNRCGEPAAECVFSNFTLLLTEEAIEEGDVINMGVIFGE 51
           V RK  KLRLDGIVKTV++L C  C EPA EC+FSNF+++L+EE IEE DVINMG+I G+
Sbjct: 161 VTRKNKKLRLDGIVKTVITLNCYSCCEPAPECIFSNFSIILSEEPIEEPDVINMGIISGK 220

Query: 50  SKKNTYNGTGEDEDED 3
               T NG  +++DE+
Sbjct: 221 DMFKTDNGNSDEDDEE 236


>ref|XP_004160572.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222143
           [Cucumis sativus]
          Length = 262

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/76 (59%), Positives = 58/76 (76%)
 Frame = -2

Query: 230 VCRKKGKLRLDGIVKTVLSLGCNRCGEPAAECVFSNFTLLLTEEAIEEGDVINMGVIFGE 51
           V RK  KLRLDGIVKTV++L C  C EPA EC+FSNF+++L+EE IEE DVINMG+I G+
Sbjct: 104 VTRKIXKLRLDGIVKTVITLNCYSCCEPAPECIFSNFSIILSEEPIEEPDVINMGIISGK 163

Query: 50  SKKNTYNGTGEDEDED 3
               T NG  +++DE+
Sbjct: 164 DMFKTDNGNSDEDDEE 179


>ref|NP_566649.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11994192|dbj|BAB01295.1| unnamed protein product
           [Arabidopsis thaliana] gi|21593774|gb|AAM65741.1|
           unknown [Arabidopsis thaliana]
           gi|109946589|gb|ABG48473.1| At3g19810 [Arabidopsis
           thaliana] gi|110742135|dbj|BAE98996.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642771|gb|AEE76292.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 321

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/76 (60%), Positives = 58/76 (76%)
 Frame = -2

Query: 230 VCRKKGKLRLDGIVKTVLSLGCNRCGEPAAECVFSNFTLLLTEEAIEEGDVINMGVIFGE 51
           V RKK KLRLDGIV+TV++LGCNRCGE   E +FSNF+LLLTEE +EE DVI++G  FG 
Sbjct: 162 VIRKKKKLRLDGIVRTVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGN 221

Query: 50  SKKNTYNGTGEDEDED 3
            K+      GED+D++
Sbjct: 222 DKEE-----GEDDDDN 232


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