BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038414
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
gb|ACU18704.1| unknown [Glycine max]                                  157   1e-36
ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...   139   2e-31

>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/140 (62%), Positives = 105/140 (75%)
 Frame = +3

Query: 3   ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 182
           +TSGE ID AL IFR IESPD YSYSN+LVGLCKFGR E+A+E F EM  A LVPT+SAV
Sbjct: 124 DTSGELIDVALSIFRGIESPDTYSYSNVLVGLCKFGRFETAIEFFQEMGRARLVPTRSAV 183

Query: 183 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 362
           NFL+ +LC L+  E  +  VRV + R+P+TILVPNVG   GAI  AV +F  + DLGL P
Sbjct: 184 NFLMRELCLLSAKEGAVNEVRVHSSRKPYTILVPNVGPKSGAIRPAVGVFLAVCDLGLLP 243

Query: 363 SPFIINQLISELCRLRKIDE 422
           S F+I QLI+ELCRL K+ E
Sbjct: 244 STFVIIQLITELCRLGKMTE 263


>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449484825|ref|XP_004156991.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 579

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/140 (58%), Positives = 99/140 (70%)
 Frame = +3

Query: 3   ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 182
           E +GE ID AL IFR+IE PD YSYSN+++GLCKFGR  +A+E F EM  A LVPT++AV
Sbjct: 219 EPTGELIDTALKIFRRIELPDKYSYSNVIIGLCKFGRYSTAIEAFGEMYRAGLVPTRTAV 278

Query: 183 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 362
           N LIG LC L+  E  +E+VRV +  RPFT+LVPNV    GAI  AV IFW    L L P
Sbjct: 279 NILIGNLCSLSAKEGAVEKVRVNSTYRPFTVLVPNVNPKSGAIEPAVGIFWAANKLSLVP 338

Query: 363 SPFIINQLISELCRLRKIDE 422
           S F+  QLISELCRL ++ E
Sbjct: 339 SSFVTVQLISELCRLGQMQE 358


>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 367

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/135 (56%), Positives = 103/135 (76%)
 Frame = +3

Query: 3   ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 182
           E+S E I+ AL IF KI++PD YS SN++VGLCK GR+ESA+E+F  M    ++PT+SAV
Sbjct: 9   ESSLEMIELALSIFHKIDAPDTYSCSNMIVGLCKLGRLESALEIFDRMNRIGVLPTRSAV 68

Query: 183 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 362
           N LIG+LC ++  E  +E+VRVRN RRP+TILVPN+G + GAI  AV++FW +   GL P
Sbjct: 69  NLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWAVCSSGLLP 128

Query: 363 SPFIINQLISELCRL 407
           S F++ +L+SELCRL
Sbjct: 129 SAFVVVKLMSELCRL 143


>gb|ACU18704.1| unknown [Glycine max]
          Length = 367

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/135 (56%), Positives = 103/135 (76%)
 Frame = +3

Query: 3   ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 182
           E+S E I+ AL IF KI++PD YS SN++VGLCK GR+ESA+E+F  M    ++PT+SAV
Sbjct: 9   ESSLEMIELALSIFHKIDAPDTYSCSNMIVGLCKLGRLESALEIFDRMNRIGVLPTRSAV 68

Query: 183 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 362
           N LIG+LC ++  E  +E+VRVRN RRP+TILVPN+G + GAI  AV++FW +   GL P
Sbjct: 69  NLLIGELCLMSGKEGSVEKVRVRNTRRPYTILVPNMGGNSGAIQPAVQVFWAVCSSGLLP 128

Query: 363 SPFIINQLISELCRL 407
           S F++ +L+SELCRL
Sbjct: 129 SAFVVVKLMSELCRL 143


>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499354|gb|AES80557.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 578

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/140 (49%), Positives = 100/140 (71%)
 Frame = +3

Query: 3   ETSGEFIDKALMIFRKIESPDVYSYSNILVGLCKFGRIESAVEVFHEMCSANLVPTKSAV 182
           ++S E I+ AL IF KIESPD YS SN++VGLC+ GR E+A+E+F +M    + PT+SA+
Sbjct: 220 QSSEEMIELALSIFDKIESPDTYSCSNMIVGLCRLGRFEAALEIFRKMDRVGVHPTRSAM 279

Query: 183 NFLIGQLCRLNTNEECLERVRVRNFRRPFTILVPNVGLDGGAILAAVKIFWLMGDLGLFP 362
           N LIG LC ++  E  +E+V+V   RRP++ILVPN+G +  AI  AV++F  + + GL P
Sbjct: 280 NVLIGDLCLMSAKEGSVEKVKVTKTRRPYSILVPNMGGNRAAIQPAVEVFSAVVNSGLLP 339

Query: 363 SPFIINQLISELCRLRKIDE 422
           S F++ +L+SELCRL   +E
Sbjct: 340 STFVVFRLMSELCRLGNTEE 359