BLASTX nr result

ID: Coptis24_contig00038395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038395
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312692.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
emb|CBI36943.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis...    99   3e-19

>ref|XP_002312692.1| predicted protein [Populus trichocarpa] gi|222852512|gb|EEE90059.1|
           predicted protein [Populus trichocarpa]
          Length = 1136

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = +2

Query: 2   FASASHDLRSSLAALDGIITLCIAEVIPNSEIHMNLEQMRTFTADLVGLLNSVLDTSKVE 181
           FASASHD+R++LA + G+I +C AE    SE+  NL+QM   T DLVGLLNS+LDTSK+E
Sbjct: 399 FASASHDIRAALAGITGLIEICYAEARAGSELDTNLQQMDDCTKDLVGLLNSILDTSKIE 458

Query: 182 AGKMQLTEEEFNLARFLEE 238
           AGKMQL EEEF+LA+ LE+
Sbjct: 459 AGKMQLEEEEFDLAKLLED 477


>ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|222861749|gb|EEE99291.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = +2

Query: 2   FASASHDLRSSLAALDGIITLCIAEVIPNSEIHMNLEQMRTFTADLVGLLNSVLDTSKVE 181
           FA+ASHD+R++LA + G+I +C AEV   SE+  NL QM   T DLVGLLNS+LDTSK+E
Sbjct: 399 FATASHDIRAALAGITGLIEICYAEVRAGSELDTNLRQMDGCTKDLVGLLNSILDTSKIE 458

Query: 182 AGKMQLTEEEFNLARFLEE 238
           AGKMQL EEEF+LA+ LE+
Sbjct: 459 AGKMQLEEEEFDLAKLLED 477


>ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|222839404|gb|EEE77741.1|
           predicted protein [Populus trichocarpa]
          Length = 1119

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = +2

Query: 2   FASASHDLRSSLAALDGIITLCIAEVIPNSEIHMNLEQMRTFTADLVGLLNSVLDTSKVE 181
           FA+ASHD+R++LA + G+I +C AEV   SE+  NL QM   T DLVGLLNS+LDTSK+E
Sbjct: 399 FATASHDIRAALAGITGLIEICYAEVRAGSELDTNLRQMDGCTKDLVGLLNSILDTSKIE 458

Query: 182 AGKMQLTEEEFNLARFLEE 238
           AGKMQL EEEF+LA+ LE+
Sbjct: 459 AGKMQLEEEEFDLAKLLED 477


>emb|CBI36943.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/79 (64%), Positives = 60/79 (75%)
 Frame = +2

Query: 2   FASASHDLRSSLAALDGIITLCIAEVIPNSEIHMNLEQMRTFTADLVGLLNSVLDTSKVE 181
           FASASHD+R+SLA L G+I +   EV P SEI  NL QM   T DL+G+LNS+LDTSK+E
Sbjct: 389 FASASHDVRASLAGLTGLIDISKDEVAPGSEIETNLIQMEGCTKDLLGILNSILDTSKIE 448

Query: 182 AGKMQLTEEEFNLARFLEE 238
           AGKMQL EEEFNL   LE+
Sbjct: 449 AGKMQLEEEEFNLEELLED 467


>ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis vinifera]
          Length = 1110

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/79 (64%), Positives = 60/79 (75%)
 Frame = +2

Query: 2   FASASHDLRSSLAALDGIITLCIAEVIPNSEIHMNLEQMRTFTADLVGLLNSVLDTSKVE 181
           FASASHD+R+SLA L G+I +   EV P SEI  NL QM   T DL+G+LNS+LDTSK+E
Sbjct: 405 FASASHDVRASLAGLTGLIDISKDEVAPGSEIETNLIQMEGCTKDLLGILNSILDTSKIE 464

Query: 182 AGKMQLTEEEFNLARFLEE 238
           AGKMQL EEEFNL   LE+
Sbjct: 465 AGKMQLEEEEFNLEELLED 483


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