BLASTX nr result
ID: Coptis24_contig00038389
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038389 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2... 162 3e-38 ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l... 159 3e-37 emb|CBI38559.3| unnamed protein product [Vitis vinifera] 159 3e-37 ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l... 155 4e-36 gb|ACY64665.1| SRS2 [Arabidopsis thaliana] 153 1e-35 >ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1| predicted protein [Populus trichocarpa] Length = 1056 Score = 162 bits (409), Expect = 3e-38 Identities = 78/100 (78%), Positives = 86/100 (86%) Frame = -1 Query: 300 QYFKDKSKKWEKFVTQAKASGKTPAECRKIGDEIGAMILENYNGILRSCNALDYHDLISC 121 +YFKDKSKKW+KFVTQAKASGKTPA+ + GDEIGA IL NYN ILRSCNALDYHDLISC Sbjct: 304 EYFKDKSKKWQKFVTQAKASGKTPADFHRRGDEIGAAILGNYNDILRSCNALDYHDLISC 363 Query: 120 SVNLLTDFPGVREQSQDLWKAMVIDEFQDTSATQYNFLRI 1 SV LLTDFP V E +D WKA+VIDEFQDTSA QY+ LR+ Sbjct: 364 SVKLLTDFPEVFEDCKDSWKAIVIDEFQDTSAMQYSLLRL 403 >ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera] Length = 1113 Score = 159 bits (401), Expect = 3e-37 Identities = 77/100 (77%), Positives = 85/100 (85%) Frame = -1 Query: 300 QYFKDKSKKWEKFVTQAKASGKTPAECRKIGDEIGAMILENYNGILRSCNALDYHDLISC 121 Q FKDKSKKW+KFVTQAKASGKTP ECR +GDEIGA IL NY+ ILR+CNALDYHDLISC Sbjct: 360 QNFKDKSKKWQKFVTQAKASGKTPEECRNMGDEIGASILGNYSKILRTCNALDYHDLISC 419 Query: 120 SVNLLTDFPGVREQSQDLWKAMVIDEFQDTSATQYNFLRI 1 SV LL+DFP V + Q+ WKA+VIDEFQDTSA QY LRI Sbjct: 420 SVKLLSDFPEVFRECQESWKAVVIDEFQDTSAMQYCLLRI 459 >emb|CBI38559.3| unnamed protein product [Vitis vinifera] Length = 951 Score = 159 bits (401), Expect = 3e-37 Identities = 77/100 (77%), Positives = 85/100 (85%) Frame = -1 Query: 300 QYFKDKSKKWEKFVTQAKASGKTPAECRKIGDEIGAMILENYNGILRSCNALDYHDLISC 121 Q FKDKSKKW+KFVTQAKASGKTP ECR +GDEIGA IL NY+ ILR+CNALDYHDLISC Sbjct: 158 QNFKDKSKKWQKFVTQAKASGKTPEECRNMGDEIGASILGNYSKILRTCNALDYHDLISC 217 Query: 120 SVNLLTDFPGVREQSQDLWKAMVIDEFQDTSATQYNFLRI 1 SV LL+DFP V + Q+ WKA+VIDEFQDTSA QY LRI Sbjct: 218 SVKLLSDFPEVFRECQESWKAVVIDEFQDTSAMQYCLLRI 257 >ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max] Length = 1123 Score = 155 bits (391), Expect = 4e-36 Identities = 73/98 (74%), Positives = 86/98 (87%) Frame = -1 Query: 294 FKDKSKKWEKFVTQAKASGKTPAECRKIGDEIGAMILENYNGILRSCNALDYHDLISCSV 115 FKDK+KKW+KFV QAKASG+T AE RK+G+EIGA IL+NYN IL+SCNALDYHDLISCSV Sbjct: 371 FKDKAKKWQKFVAQAKASGRTSAEYRKMGNEIGAAILKNYNNILKSCNALDYHDLISCSV 430 Query: 114 NLLTDFPGVREQSQDLWKAMVIDEFQDTSATQYNFLRI 1 LL+DFP V ++ QD WKA+VIDEFQDTSA QY FL++ Sbjct: 431 KLLSDFPEVFKECQDSWKAIVIDEFQDTSAMQYKFLKM 468 >gb|ACY64665.1| SRS2 [Arabidopsis thaliana] Length = 1147 Score = 153 bits (387), Expect = 1e-35 Identities = 69/102 (67%), Positives = 85/102 (83%) Frame = -1 Query: 306 CAQYFKDKSKKWEKFVTQAKASGKTPAECRKIGDEIGAMILENYNGILRSCNALDYHDLI 127 C +Y KD SKKW+KFVTQ KASGK+P +CRK+G+EIGA IL NYN IL++C+ALDYHDLI Sbjct: 397 CPEYAKDLSKKWQKFVTQGKASGKSPEQCRKMGNEIGAKILGNYNDILKACDALDYHDLI 456 Query: 126 SCSVNLLTDFPGVREQSQDLWKAMVIDEFQDTSATQYNFLRI 1 SCSV LL+DFP V ++ QD WKA+++DEFQDTS QY LR+ Sbjct: 457 SCSVTLLSDFPEVFKECQDTWKAIIVDEFQDTSTMQYKLLRM 498