BLASTX nr result
ID: Coptis24_contig00038354
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038354 (341 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 158 5e-37 emb|CBI19566.3| unnamed protein product [Vitis vinifera] 158 5e-37 ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote... 158 5e-37 ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote... 153 2e-35 ref|XP_002510266.1| nuclear acid binding protein, putative [Rici... 152 4e-35 >ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 1 [Vitis vinifera] Length = 409 Score = 158 bits (399), Expect = 5e-37 Identities = 75/113 (66%), Positives = 91/113 (80%) Frame = +1 Query: 1 VSVEDLKKIFSQHGEVVSVRIPSRKGFGFVEFANRSNAEEALQKLHRTVIGKQTVYLSWC 180 VS EDL++ FSQ+GE+VSV+IP KG GFV+FANR+NAE+ALQKL+ TVIGKQTV LSW Sbjct: 290 VSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWG 349 Query: 181 KNPANKQLRVNRGNQWSGTYYGSKISEGYGYAATPLPDSSMPGGAYGTYPVYG 339 +NPANKQ+R + GNQWSG YYG ++ +GYGYA P D +M AYG YPVYG Sbjct: 350 RNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYG 402 >emb|CBI19566.3| unnamed protein product [Vitis vinifera] Length = 324 Score = 158 bits (399), Expect = 5e-37 Identities = 75/113 (66%), Positives = 91/113 (80%) Frame = +1 Query: 1 VSVEDLKKIFSQHGEVVSVRIPSRKGFGFVEFANRSNAEEALQKLHRTVIGKQTVYLSWC 180 VS EDL++ FSQ+GE+VSV+IP KG GFV+FANR+NAE+ALQKL+ TVIGKQTV LSW Sbjct: 205 VSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWG 264 Query: 181 KNPANKQLRVNRGNQWSGTYYGSKISEGYGYAATPLPDSSMPGGAYGTYPVYG 339 +NPANKQ+R + GNQWSG YYG ++ +GYGYA P D +M AYG YPVYG Sbjct: 265 RNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYG 317 >ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 2 [Vitis vinifera] Length = 418 Score = 158 bits (399), Expect = 5e-37 Identities = 75/113 (66%), Positives = 91/113 (80%) Frame = +1 Query: 1 VSVEDLKKIFSQHGEVVSVRIPSRKGFGFVEFANRSNAEEALQKLHRTVIGKQTVYLSWC 180 VS EDL++ FSQ+GE+VSV+IP KG GFV+FANR+NAE+ALQKL+ TVIGKQTV LSW Sbjct: 299 VSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWG 358 Query: 181 KNPANKQLRVNRGNQWSGTYYGSKISEGYGYAATPLPDSSMPGGAYGTYPVYG 339 +NPANKQ+R + GNQWSG YYG ++ +GYGYA P D +M AYG YPVYG Sbjct: 359 RNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYG 411 >ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like [Glycine max] Length = 425 Score = 153 bits (386), Expect = 2e-35 Identities = 73/113 (64%), Positives = 90/113 (79%) Frame = +1 Query: 1 VSVEDLKKIFSQHGEVVSVRIPSRKGFGFVEFANRSNAEEALQKLHRTVIGKQTVYLSWC 180 VS EDL++ FSQ+GE+VSV+IP KG GFV+FANR+NAEEALQKL+ T IGKQTV LSW Sbjct: 306 VSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWG 365 Query: 181 KNPANKQLRVNRGNQWSGTYYGSKISEGYGYAATPLPDSSMPGGAYGTYPVYG 339 +NPANKQ R++ GN W+G YYG+ + +GYGYA TP D S+ AYG YP+YG Sbjct: 366 RNPANKQFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIYAAAYGAYPLYG 418 >ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis] gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis] Length = 443 Score = 152 bits (383), Expect = 4e-35 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 1/114 (0%) Frame = +1 Query: 1 VSVEDLKKIFSQHGEVVSVRIPSRKGFGFVEFANRSNAEEALQKLHRTVIGKQTVYLSWC 180 V+ EDLK+ FSQ+GE+VSV+IP KG GFV+FA+RSNAEEALQKL+ TVIGKQTV LSW Sbjct: 323 VTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWG 382 Query: 181 KNPANK-QLRVNRGNQWSGTYYGSKISEGYGYAATPLPDSSMPGGAYGTYPVYG 339 +NPANK QLR + GNQW G YYG +I +GYGYA P D SM YG YPVYG Sbjct: 383 RNPANKQQLRSDFGNQWGGAYYGGQIYDGYGYALPPPHDPSMYAAPYGAYPVYG 436