BLASTX nr result

ID: Coptis24_contig00038351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038351
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512500.1| histidine kinase 1 plant, putative [Ricinus ...    70   2e-10
emb|CBI36943.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis...    66   3e-09
emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]    66   3e-09
ref|XP_002319485.1| histidine kinase cytokinin receptor [Populus...    65   6e-09

>ref|XP_002512500.1| histidine kinase 1 plant, putative [Ricinus communis]
           gi|223548461|gb|EEF49952.1| histidine kinase 1 plant,
           putative [Ricinus communis]
          Length = 912

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = -2

Query: 284 QEQLFLSTVAIDGLGVVSIGFPVKNYMDAISRIDLHGGDMYLATKDGISLAQTGP--HRV 111
           Q+ LFL+T A+DG GV+S+GFP K  +D  S +D HGG  YL T DG  + QT P   ++
Sbjct: 30  QDSLFLNTAAMDGRGVISLGFPTKAIIDNFSALDFHGGYFYLGTVDGQVIMQTIPPDTQI 89

Query: 110 KLNNGSVSIVGTNSSENLATSQNIPCEPSDETL 12
            + NGSV++   N +       N+ C   D  L
Sbjct: 90  DMLNGSVTVQIFNPNGGKMGQDNLSCFSVDGKL 122


>emb|CBI36943.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
 Frame = -2

Query: 281 EQLFLSTVAIDGLGVVSIGFPVKNYMDAISRIDLHGGDMYLATKDGISLAQTGPH-RVKL 105
           + LFL+T  +DG G VS+GFPVK   D +S IDLH G + LAT+D   L +  P+ ++ +
Sbjct: 192 QDLFLNTAKVDGRGAVSLGFPVKEVTDFLSVIDLHDGSLCLATEDNKVLIEGLPNTQIMV 251

Query: 104 NNGSVS--IVGTNSSENLATSQNIPCEPSDET 15
           +N S+S  +V     + ++   N+ C+  D T
Sbjct: 252 SNDSISFKVVENQDGDQISHVGNVSCKADDRT 283


>ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis vinifera]
          Length = 1110

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
 Frame = -2

Query: 281 EQLFLSTVAIDGLGVVSIGFPVKNYMDAISRIDLHGGDMYLATKDGISLAQTGPH-RVKL 105
           + LFL+T  +DG G VS+GFPVK   D +S IDLH G + LAT+D   L +  P+ ++ +
Sbjct: 208 QDLFLNTAKVDGRGAVSLGFPVKEVTDFLSVIDLHDGSLCLATEDNKVLIEGLPNTQIMV 267

Query: 104 NNGSVS--IVGTNSSENLATSQNIPCEPSDET 15
           +N S+S  +V     + ++   N+ C+  D T
Sbjct: 268 SNDSISFKVVENQDGDQISHVGNVSCKADDRT 299


>emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]
          Length = 1143

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
 Frame = -2

Query: 281 EQLFLSTVAIDGLGVVSIGFPVKNYMDAISRIDLHGGDMYLATKDGISLAQTGPH-RVKL 105
           + LFL+T  +DG G VS+GFPVK   D +S IDLH G + LAT+D   L +  P+ ++ +
Sbjct: 241 QDLFLNTAKVDGRGAVSLGFPVKEVTDFLSVIDLHDGSLCLATEDNKVLIEGLPNTQIMV 300

Query: 104 NNGSVS--IVGTNSSENLATSQNIPCEPSDET 15
           +N S+S  +V     + ++   N+ C+  D T
Sbjct: 301 SNDSISFKVVENQDGDQISHVGNVSCKADDRT 332


>ref|XP_002319485.1| histidine kinase cytokinin receptor [Populus trichocarpa]
           gi|222857861|gb|EEE95408.1| histidine kinase cytokinin
           receptor [Populus trichocarpa]
          Length = 1001

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = -2

Query: 290 KDQEQLFLSTVAIDGLGVVSIGFPVKNYMDAISRIDLHGGDMYLATKDGISLAQT--GPH 117
           K Q+ LFL+T A+DG GVVS+GFPV+  ++  + +D HGG  +L T +G  + QT     
Sbjct: 113 KAQDSLFLNTAAVDGRGVVSLGFPVEVVINHFAALDFHGGFFHLGTANGQVVVQTKLPNS 172

Query: 116 RVKLNNGSVSIVGTNSSENLATSQNIPCEPSDETL 12
           +++++N +V +     + +     NI C+P D  L
Sbjct: 173 QIEIHNDTVMVQTMKRNGDPLGHYNISCDPEDGRL 207


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