BLASTX nr result

ID: Coptis24_contig00038349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038349
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japo...    94   2e-17
gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indi...    94   2e-17
ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group] g...    94   2e-17
gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]         91   8e-17
ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containi...    91   8e-17

>gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
          Length = 983

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = -1

Query: 219 WSTMIDVLAMHGCGRRAIDVFDEMERFGIEPDEMAFTSVLCACSHAGLLHQGEMWFERMS 40
           W+TMI  LAMHG G  A+++F +MER G++PD++AF   LCAC+H GL+ +G   F+ M 
Sbjct: 412 WTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMV 471

Query: 39  CDYGLKPKIQHYG 1
             YG+KPKI+HYG
Sbjct: 472 RKYGIKPKIEHYG 484


>gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
          Length = 639

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = -1

Query: 219 WSTMIDVLAMHGCGRRAIDVFDEMERFGIEPDEMAFTSVLCACSHAGLLHQGEMWFERMS 40
           W+TMI  LAMHG G  A+++F +MER G++PD++AF   LCAC+H GL+ +G   F+ M 
Sbjct: 205 WTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMV 264

Query: 39  CDYGLKPKIQHYG 1
             YG+KPKI+HYG
Sbjct: 265 RKYGIKPKIEHYG 277


>ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
           gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa
           Japonica Group]
          Length = 951

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = -1

Query: 219 WSTMIDVLAMHGCGRRAIDVFDEMERFGIEPDEMAFTSVLCACSHAGLLHQGEMWFERMS 40
           W+TMI  LAMHG G  A+++F +MER G++PD++AF   LCAC+H GL+ +G   F+ M 
Sbjct: 412 WTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMV 471

Query: 39  CDYGLKPKIQHYG 1
             YG+KPKI+HYG
Sbjct: 472 RKYGIKPKIEHYG 484


>gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
          Length = 582

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = -1

Query: 219 WSTMIDVLAMHGCGRRAIDVFDEMERFGIEPDEMAFTSVLCACSHAGLLHQGEMWFERMS 40
           W+TMI  LAMHG G  A+ +F +ME  GI PD++AF  VLCAC+HAGL+ +G   F+ M 
Sbjct: 278 WTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMV 337

Query: 39  CDYGLKPKIQHYG 1
             YG+KPKI+HYG
Sbjct: 338 RKYGIKPKIEHYG 350


>ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Brachypodium distachyon]
          Length = 611

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 37/73 (50%), Positives = 56/73 (76%)
 Frame = -1

Query: 219 WSTMIDVLAMHGCGRRAIDVFDEMERFGIEPDEMAFTSVLCACSHAGLLHQGEMWFERMS 40
           W+++ID LAM G G+ A+ VF+EM+  G+ PD++AF  VL ACSHAG++ +G  +F+ M 
Sbjct: 308 WTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMK 367

Query: 39  CDYGLKPKIQHYG 1
            +YG++PKI+HYG
Sbjct: 368 TEYGIEPKIEHYG 380


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