BLASTX nr result

ID: Coptis24_contig00038344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038344
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|22352...    85   5e-15
ref|XP_004156651.1| PREDICTED: L-type lectin-domain containing r...    82   5e-14
ref|XP_004137932.1| PREDICTED: L-type lectin-domain containing r...    82   5e-14
ref|XP_002888754.1| lectin protein kinase family protein [Arabid...    81   8e-14
ref|XP_002267597.1| PREDICTED: L-type lectin-domain containing r...    81   1e-13

>ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|223525084|gb|EEF27843.1|
           kinase, putative [Ricinus communis]
          Length = 669

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/79 (51%), Positives = 50/79 (63%)
 Frame = +2

Query: 2   VWVEYNGTEKQLNVTLSPVNVPKXXXXXXXXXXXXXXXXXETMYVGFSSSTGRFTASQSI 181
           +WVEY+G +KQLNVTL+P+ + K                  TMYVGFSSSTG    S  +
Sbjct: 192 LWVEYDGAKKQLNVTLAPIKIGKPSVPLLSLTRDLSPILQNTMYVGFSSSTGSVLTSHYV 251

Query: 182 LGWSFMMNGKAQPLDLSRL 238
           LGWS+ MNG+AQPLDLS L
Sbjct: 252 LGWSYKMNGQAQPLDLSAL 270


>ref|XP_004156651.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IV.2-like [Cucumis sativus]
          Length = 703

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   VWVEYNGTEKQLNVTLSPVNVPKXXXXXXXXXXXXXXXXXET-MYVGFSSSTGRFTASQS 178
           VW+EY+G  K++NVTL+P+N+PK                  + M+VGFSSSTG  + S  
Sbjct: 223 VWIEYDGINKEINVTLAPINIPKPKIPLLSYVWDLSSVIKNSSMFVGFSSSTGSVSTSHY 282

Query: 179 ILGWSFMMNGKAQPLDLSRLSNKIVRKK 262
           ILGWSF +NG+AQ LD+SRL  K+ +KK
Sbjct: 283 ILGWSFRLNGQAQSLDISRLP-KLPQKK 309


>ref|XP_004137932.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IV.2-like [Cucumis sativus]
          Length = 706

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   VWVEYNGTEKQLNVTLSPVNVPKXXXXXXXXXXXXXXXXXET-MYVGFSSSTGRFTASQS 178
           VW+EY+G  K++NVTL+P+N+PK                  + M+VGFSSSTG  + S  
Sbjct: 223 VWIEYDGINKEINVTLAPINIPKPKIPLLSYVWDLSSVIKNSSMFVGFSSSTGSVSTSHY 282

Query: 179 ILGWSFMMNGKAQPLDLSRLSNKIVRKK 262
           ILGWSF +NG+AQ LD+SRL  K+ +KK
Sbjct: 283 ILGWSFRLNGQAQSLDISRLP-KLPQKK 309


>ref|XP_002888754.1| lectin protein kinase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334595|gb|EFH65013.1| lectin protein
           kinase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/81 (49%), Positives = 49/81 (60%)
 Frame = +2

Query: 2   VWVEYNGTEKQLNVTLSPVNVPKXXXXXXXXXXXXXXXXXETMYVGFSSSTGRFTASQSI 181
           VW+EY+  ++QLNVTL P+ VPK                 E MY+GFSSSTG  TAS  I
Sbjct: 180 VWIEYDSKQRQLNVTLHPIRVPKPKIPLLSLQKDLSPYLLEFMYLGFSSSTGTLTASHYI 239

Query: 182 LGWSFMMNGKAQPLDLSRLSN 244
           LGW+F +NG A  +D SRL N
Sbjct: 240 LGWTFKINGTAPAIDPSRLPN 260


>ref|XP_002267597.1| PREDICTED: L-type lectin-domain containing receptor kinase S.4-like
           [Vitis vinifera]
          Length = 672

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/86 (47%), Positives = 54/86 (62%)
 Frame = +2

Query: 5   WVEYNGTEKQLNVTLSPVNVPKXXXXXXXXXXXXXXXXXETMYVGFSSSTGRFTASQSIL 184
           W+EY+ T+K +NVT+SP+ VPK                 ETMYVGFSS+TG+ ++S  IL
Sbjct: 200 WIEYDATKKSVNVTISPLFVPKPVRPLLSTRVDLSHILKETMYVGFSSATGKLSSSHYIL 259

Query: 185 GWSFMMNGKAQPLDLSRLSNKIVRKK 262
           GWSF MN  A PL+ SRL + +  KK
Sbjct: 260 GWSFRMNEVAVPLNPSRLPSFLRAKK 285


Top