BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038341
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   127   1e-27
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   122   2e-26
ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat...   122   2e-26
ref|XP_002887547.1| pentatricopeptide repeat-containing protein ...   122   4e-26
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   120   1e-25

>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
           unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = -1

Query: 237 AVVKCQKDPLRALEMFNSAAKEDGFKHTVYTYKCMVEKLGLHGKFEAMEGVMSEMRRNVD 58
           AVVK QK+PL+ALE+FNS  KEDGFKHT+ TYK M+EKLG HG+FEAME V++E R N+D
Sbjct: 12  AVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNID 71

Query: 57  NGLMEGVYIGAMRNYGRNG 1
           NGL+EGVYIGAMRNYGR G
Sbjct: 72  NGLLEGVYIGAMRNYGRKG 90


>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/79 (69%), Positives = 67/79 (84%)
 Frame = -1

Query: 237 AVVKCQKDPLRALEMFNSAAKEDGFKHTVYTYKCMVEKLGLHGKFEAMEGVMSEMRRNVD 58
           AV++ Q DPL AL+MFN    EDGFKHT+ TYKCM+EKLGLHGKFEAME V++EMR+NVD
Sbjct: 12  AVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVD 71

Query: 57  NGLMEGVYIGAMRNYGRNG 1
           + ++EGVYIG MR+YGR G
Sbjct: 72  SKMLEGVYIGIMRDYGRKG 90


>ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/79 (69%), Positives = 67/79 (84%)
 Frame = -1

Query: 237 AVVKCQKDPLRALEMFNSAAKEDGFKHTVYTYKCMVEKLGLHGKFEAMEGVMSEMRRNVD 58
           AV++ Q DPL AL+MFN    EDGFKHT+ TYKCM+EKLGLHGKFEAME V++EMR+NVD
Sbjct: 12  AVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVD 71

Query: 57  NGLMEGVYIGAMRNYGRNG 1
           + ++EGVYIG MR+YGR G
Sbjct: 72  SKMLEGVYIGIMRDYGRKG 90


>ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333388|gb|EFH63806.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 763

 Score =  122 bits (305), Expect = 4e-26
 Identities = 53/78 (67%), Positives = 69/78 (88%)
 Frame = -1

Query: 234 VVKCQKDPLRALEMFNSAAKEDGFKHTVYTYKCMVEKLGLHGKFEAMEGVMSEMRRNVDN 55
           V++CQKDP++ALEMFNS  KEDGFKHT+ TY+ ++EKLGL+GKFEAME V+ +MR+NV N
Sbjct: 13  VIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGN 72

Query: 54  GLMEGVYIGAMRNYGRNG 1
            ++EGVY+GAM+NYGR G
Sbjct: 73  HMLEGVYVGAMKNYGRKG 90


>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/79 (70%), Positives = 65/79 (82%)
 Frame = -1

Query: 237 AVVKCQKDPLRALEMFNSAAKEDGFKHTVYTYKCMVEKLGLHGKFEAMEGVMSEMRRNVD 58
           AV+K QKDPL+AL +FNS  KEDGFKHT  TYK M+EKLG HG+F+AME V+ EMR NVD
Sbjct: 12  AVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVD 71

Query: 57  NGLMEGVYIGAMRNYGRNG 1
           N L+EGVY+ AMRNYGR G
Sbjct: 72  NSLLEGVYVSAMRNYGRKG 90