BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038330
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612650.1| F-box family protein [Medicago truncatula] g...    67   1e-09
ref|XP_003629127.1| F-box family protein [Medicago truncatula] g...    67   2e-09
ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...    67   2e-09
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_003612650.1| F-box family protein [Medicago truncatula]
           gi|355513985|gb|AES95608.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 34/184 (18%)
 Frame = -1

Query: 451 VCQTWHGLINDRRLSFMHYVQAS----------RRINPTTSLILYNGPGLYYIPDFNTCQ 302
           VC+TW+ LI++   + ++   AS          R ++ T  L+ Y         D +   
Sbjct: 52  VCKTWNALISEPYFATLYSQHASLGFLLRTRNLRLVSRTLHLLEYQPKKFRRAFDID--- 108

Query: 301 NVVVFN---NLPFKSW------LPY------FKVVASQNGFICVAADGCSYRNIFICNPV 167
            VV FN    LP ++        PY      F VV S NG +C++ +  +  ++ +CNP+
Sbjct: 109 -VVNFNPKFKLPLRNANDTYQPTPYKPEDDKFSVVNSCNGLLCLS-EPYTVNHLVVCNPI 166

Query: 166 IGEWFLVPRSETLYGTNY----GFGYELETNEYKIVRM-----RFCKDEDNYDVEIHKLG 14
           IGE+  +P +  +  T        G++ +TNEYK++RM      +C   D   VE+H LG
Sbjct: 167 IGEFIRLPEAIGIANTRKPICAALGFQPKTNEYKVIRMWKRCDGWCYKSDVMVVEMHTLG 226

Query: 13  TSTW 2
           T+TW
Sbjct: 227 TATW 230


>ref|XP_003629127.1| F-box family protein [Medicago truncatula]
           gi|355523149|gb|AET03603.1| F-box family protein
           [Medicago truncatula]
          Length = 234

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
 Frame = -1

Query: 469 LFENRYVCQTWHGLINDRRLSFMHYVQASRRINPTTSL-------ILYNGPGLYYIPDFN 311
           L + + VC++W+ LI+D + +  H   ++ R+  T +        IL + P      D  
Sbjct: 47  LIQFQCVCKSWNSLISDPKFAEKHCRLSTTRLVHTLTFSNLPYKHILKSYPLHSVFIDLT 106

Query: 310 TCQNVVVFNNLPFKSWLPYFKVVASQNGFICV-AADGCSYRNIFICNPVIGEWFLVPRSE 134
           T Q       L   S   YF  V S NG +C+ A D   + +I + NP I ++  +P  +
Sbjct: 107 TNQTAHPITQLETPSKY-YFYFVGSCNGILCLLACDYAGFVSIRLWNPSIRKFKELPYLQ 165

Query: 133 TLYGTNYGFGYELETNEYK-IVRMRFCKDEDN-YDVEIHKLGTSTW 2
              G  YGFGY+  TN YK +V +R C    N ++V ++ L T +W
Sbjct: 166 KQEGVMYGFGYDAVTNNYKVVVVLRACYSSGNSFEVNVYTLSTDSW 211


>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
           gi|355513981|gb|AES95604.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 34/184 (18%)
 Frame = -1

Query: 451 VCQTWHGLINDRRLSFMHYVQAS----------RRINPTTSLILYNGPGLYYIPDFNTCQ 302
           VC+TW+ LI++   + ++   AS          R ++ T  L+ Y         D +   
Sbjct: 52  VCKTWNALISEPYFATLYSQHASLGFLLRTRNLRLVSRTLHLLEYQPKKFRRAFDID--- 108

Query: 301 NVVVFN---NLPFKSW------LPY------FKVVASQNGFICVAADGCSYRNIFICNPV 167
            VV FN    LP ++        PY      F VV S NG +C++ +  +  ++ +CNP+
Sbjct: 109 -VVNFNPKFKLPLRNANDTYQPTPYKPEDDKFGVVNSCNGLLCLS-EPYTVNHLVVCNPI 166

Query: 166 IGEWFLVPRSETLYGTNY----GFGYELETNEYKIVRM-----RFCKDEDNYDVEIHKLG 14
           IGE+  +P +  +  T        G++ +TNEYK++RM      +C   D   VE+H LG
Sbjct: 167 IGEFIRLPEAIGIANTRKPICAALGFQPKTNEYKVIRMWKRCDGWCYKSDVMVVEMHTLG 226

Query: 13  TSTW 2
           T+TW
Sbjct: 227 TTTW 230


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
 Frame = -1

Query: 469 LFENRYVCQTWHGLINDRRL---SFMHYVQASRRINPTTSLILYNGPG-----LYYIPDF 314
           L + R VCQ+WH LI +         H ++ + R++    +   + P      + YI D 
Sbjct: 22  LLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYALVKQKSVPDCKERFILYIDDD 81

Query: 313 NTCQNVVVFNNL--PFKSWLPYFKVVASQNGFICVAADGCSYRNIFICNPVIGEWFLVPR 140
           +  +   V+  L  PFK    Y ++++S NG +C++     Y   ++ NPVI +   +  
Sbjct: 82  SGDEPFRVYQELDFPFKGER-YLEIISSCNGLVCLSDS--QYARFYLWNPVIRKCLTILS 138

Query: 139 SETLYGTNYGFGYELETNEYKIVRMRFCKDEDN--YDVEIHKLGTSTW 2
           S++ +    GFG+E + N+YK+V++    ++ N    V+I+ L TS W
Sbjct: 139 SDSSFIV--GFGFEYKKNDYKVVKIMHHPEKMNPVLIVKIYDLSTSAW 184


>ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|222871559|gb|EEF08690.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
 Frame = -1

Query: 457 RYVCQTWHGLINDRRLSFMHYVQASRRI-------NPTT-SLILYNGPGLYYIPDFNTCQ 302
           R VC+TW   I+D   + +H  ++   +       NP + +L L    G      F   +
Sbjct: 16  RCVCKTWLHYISDSFFAKLHLERSPTSLLLKTISNNPESRNLQLVQVTGKPLGLRFRVVE 75

Query: 301 NV--VVFNNLPFKSWLPYFKVVASQNGFICVAA---DGCSYRNIFICNPVIGEWFLVPRS 137
            +  V   NLP+  +L    +  S NG +C++    DG S+ +I++CNP++GE+  +P +
Sbjct: 76  EMKFVPGINLPYNDFL----IENSCNGLLCISQTFQDG-SHDDIYLCNPILGEYISIPPA 130

Query: 136 ---ETLYGTNYGFGYELETNEYKIVRMRFCKDEDNY---DVEIHKLGTSTW 2
              ET + +N+  GY     EYK++   FC    +Y   + EI+ +GT  W
Sbjct: 131 AGQETRHQSNFALGYCAIAKEYKVLH-TFCSKTGSYYQPEAEIYTIGTGKW 180