BLASTX nr result

ID: Coptis24_contig00038313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038313
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinu...   125   5e-27
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...   124   6e-27
emb|CBI23975.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002269290.1| PREDICTED: glutamate receptor 2.7-like [Viti...   121   7e-26
emb|CAN80457.1| hypothetical protein VITISV_040422 [Vitis vinifera]   121   7e-26

>ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 961

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/91 (63%), Positives = 72/91 (79%)
 Frame = +1

Query: 1   RDMYTNKTAITGYAIDVFNLVMAALPYFVAYEFVPFMNADGSSSGSNDELVYQLHTERFD 180
           RD  TN T + GY IDVF+ V+ ALPY V YE++PF N DGSS+G+ D+LVYQ++T +FD
Sbjct: 480 RDPSTNITTVRGYCIDVFDAVVKALPYTVTYEYIPFANPDGSSAGTYDDLVYQVYTGKFD 539

Query: 181 AVVGDTTITSKRSMYADFTLPYTEGGVSMMV 273
           AVVGDTTI + RS+Y DFT PYTE GVSM+V
Sbjct: 540 AVVGDTTIIANRSLYVDFTFPYTESGVSMIV 570


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 931

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/91 (63%), Positives = 71/91 (78%)
 Frame = +1

Query: 1   RDMYTNKTAITGYAIDVFNLVMAALPYFVAYEFVPFMNADGSSSGSNDELVYQLHTERFD 180
           RD  TN T + GY IDVF+ V+ ALPY V YE+ PF+N DGSS+G+ D+LVYQ++T  FD
Sbjct: 456 RDPSTNTTTVRGYCIDVFDAVVKALPYAVTYEYTPFVNPDGSSAGTYDDLVYQVYTGEFD 515

Query: 181 AVVGDTTITSKRSMYADFTLPYTEGGVSMMV 273
           AVVGDTTI + RS+Y DFT PYTE GVSM+V
Sbjct: 516 AVVGDTTIIANRSLYVDFTFPYTESGVSMIV 546


>emb|CBI23975.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/91 (59%), Positives = 71/91 (78%)
 Frame = +1

Query: 1   RDMYTNKTAITGYAIDVFNLVMAALPYFVAYEFVPFMNADGSSSGSNDELVYQLHTERFD 180
           RD  TN T +TGY I +F+ VMAALPY V YE++PF   DG  +G+ D+L+YQ++ +++D
Sbjct: 474 RDPITNATKVTGYCIAIFDAVMAALPYAVPYEYIPFETPDGKPTGNYDDLIYQVYLQKYD 533

Query: 181 AVVGDTTITSKRSMYADFTLPYTEGGVSMMV 273
           AVVGDTTI + RS+Y DFTLPYTE GVSM+V
Sbjct: 534 AVVGDTTIVANRSLYVDFTLPYTESGVSMIV 564


>ref|XP_002269290.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/91 (59%), Positives = 71/91 (78%)
 Frame = +1

Query: 1   RDMYTNKTAITGYAIDVFNLVMAALPYFVAYEFVPFMNADGSSSGSNDELVYQLHTERFD 180
           RD  TN T +TGY I +F+ VMAALPY V YE++PF   DG  +G+ D+L+YQ++ +++D
Sbjct: 448 RDPITNATKVTGYCIAIFDAVMAALPYAVPYEYIPFETPDGKPTGNYDDLIYQVYLQKYD 507

Query: 181 AVVGDTTITSKRSMYADFTLPYTEGGVSMMV 273
           AVVGDTTI + RS+Y DFTLPYTE GVSM+V
Sbjct: 508 AVVGDTTIVANRSLYVDFTLPYTESGVSMIV 538


>emb|CAN80457.1| hypothetical protein VITISV_040422 [Vitis vinifera]
          Length = 957

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/91 (59%), Positives = 71/91 (78%)
 Frame = +1

Query: 1   RDMYTNKTAITGYAIDVFNLVMAALPYFVAYEFVPFMNADGSSSGSNDELVYQLHTERFD 180
           RD  TN T +TGY I +F+ VMAALPY V YE++PF   DG  +G+ D+L+YQ++ +++D
Sbjct: 474 RDPITNATKVTGYCIAIFDAVMAALPYAVPYEYIPFETPDGKPTGNYDDLIYQVYLQKYD 533

Query: 181 AVVGDTTITSKRSMYADFTLPYTEGGVSMMV 273
           AVVGDTTI + RS+Y DFTLPYTE GVSM+V
Sbjct: 534 AVVGDTTIVANRSLYVDFTLPYTESGVSMIV 564


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