BLASTX nr result

ID: Coptis24_contig00038301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038301
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888789.1| hypothetical protein ARALYDRAFT_894888 [Arab...   236   2e-60
ref|NP_177228.1| endoglucanase 8 [Arabidopsis thaliana] gi|75262...   234   4e-60
emb|CAA67157.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]        234   4e-60
ref|XP_002311518.1| predicted protein [Populus trichocarpa] gi|2...   234   5e-60
ref|NP_173735.1| endoglucanase 4 [Arabidopsis thaliana] gi|75318...   233   9e-60

>ref|XP_002888789.1| hypothetical protein ARALYDRAFT_894888 [Arabidopsis lyrata subsp.
           lyrata] gi|297334630|gb|EFH65048.1| hypothetical protein
           ARALYDRAFT_894888 [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/130 (85%), Positives = 121/130 (93%)
 Frame = +1

Query: 1   HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 180
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDL+GGYYDAGDN+KF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLSGGYYDAGDNIKF 85

Query: 181 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 360
           GFPMAFTTTMLSWSIIDFGKTMG ELKNAV AVKW TDYLLK TA+P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMLSWSIIDFGKTMGPELKNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSD 145

Query: 361 HNCWERPEDM 390
           HNCWERPEDM
Sbjct: 146 HNCWERPEDM 155


>ref|NP_177228.1| endoglucanase 8 [Arabidopsis thaliana]
           gi|75262268|sp|Q9CAC1.1|GUN8_ARATH RecName:
           Full=Endoglucanase 8; AltName: Full=Cellulase 1;
           Short=AtCEL1; AltName: Full=Endo-1,4-beta glucanase 8;
           Flags: Precursor gi|12324747|gb|AAG52329.1|AC011663_8
           endo-1,4-beta-glucanase; 41628-45234 [Arabidopsis
           thaliana] gi|15081781|gb|AAK82545.1| At1g70710/F5A18_11
           [Arabidopsis thaliana] gi|18377811|gb|AAL67092.1|
           At1g70710/F5A18_11 [Arabidopsis thaliana]
           gi|332196982|gb|AEE35103.1| endoglucanase 8 [Arabidopsis
           thaliana]
          Length = 492

 Score =  234 bits (598), Expect = 4e-60
 Identities = 110/130 (84%), Positives = 121/130 (93%)
 Frame = +1

Query: 1   HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 180
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDL+GGYYDAGDN+KF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLSGGYYDAGDNIKF 85

Query: 181 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 360
           GFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSD 145

Query: 361 HNCWERPEDM 390
           HNCWERPEDM
Sbjct: 146 HNCWERPEDM 155


>emb|CAA67157.1| endo-1,4-beta-glucanase [Arabidopsis thaliana]
          Length = 492

 Score =  234 bits (598), Expect = 4e-60
 Identities = 110/130 (84%), Positives = 121/130 (93%)
 Frame = +1

Query: 1   HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 180
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDL+GGYYDAGDN+KF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLSGGYYDAGDNIKF 85

Query: 181 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 360
           GFPMAFTTTMLSWSIIDFGKTMG EL+NAV AVKW TDYLLK TA+P  V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMLSWSIIDFGKTMGPELRNAVKAVKWGTDYLLKATAIPGVVFVQVGDAYSD 145

Query: 361 HNCWERPEDM 390
           HNCWERPEDM
Sbjct: 146 HNCWERPEDM 155


>ref|XP_002311518.1| predicted protein [Populus trichocarpa] gi|222851338|gb|EEE88885.1|
           predicted protein [Populus trichocarpa]
           gi|347466561|gb|AEO97193.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466615|gb|AEO97220.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 496

 Score =  234 bits (597), Expect = 5e-60
 Identities = 110/130 (84%), Positives = 120/130 (92%)
 Frame = +1

Query: 1   HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 180
           H+Y DAL+KSILFFEGQRSGKLPP+QR+KWR DSAL DG ST G DLTGGYYDAGDN+KF
Sbjct: 34  HDYHDALRKSILFFEGQRSGKLPPDQRVKWRRDSALHDG-STVGRDLTGGYYDAGDNIKF 92

Query: 181 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 360
           GFPMAFTTT+LSWSI+DFG+ MG ELKNAV AVKWATDYLLKVTAVP+ VYVQVGDA+SD
Sbjct: 93  GFPMAFTTTLLSWSIVDFGRNMGPELKNAVKAVKWATDYLLKVTAVPDVVYVQVGDAYSD 152

Query: 361 HNCWERPEDM 390
           HNCWERPEDM
Sbjct: 153 HNCWERPEDM 162


>ref|NP_173735.1| endoglucanase 4 [Arabidopsis thaliana]
           gi|75318356|sp|O49296.1|GUN4_ARATH RecName:
           Full=Endoglucanase 4; AltName: Full=Endo-1,4-beta
           glucanase 4; Flags: Precursor
           gi|9295689|gb|AAF86995.1|AC005292_4 F26F24.6
           [Arabidopsis thaliana] gi|2829908|gb|AAC00616.1|
           Hypothetical protein [Arabidopsis thaliana]
           gi|67633382|gb|AAY78616.1| glycosyl hydrolase family 9
           protein [Arabidopsis thaliana]
           gi|111074226|gb|ABH04486.1| At1g23210 [Arabidopsis
           thaliana] gi|332192236|gb|AEE30357.1| endoglucanase 4
           [Arabidopsis thaliana]
          Length = 489

 Score =  233 bits (595), Expect = 9e-60
 Identities = 107/130 (82%), Positives = 121/130 (93%)
 Frame = +1

Query: 1   HNYEDALQKSILFFEGQRSGKLPPNQRLKWRCDSALKDGFSTAGVDLTGGYYDAGDNVKF 180
           H+Y DAL+KSILFFEGQRSGKLPP+QRLKWR DSAL+DG S+AGVDLTGGYYDAGDNVKF
Sbjct: 27  HDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDG-SSAGVDLTGGYYDAGDNVKF 85

Query: 181 GFPMAFTTTMLSWSIIDFGKTMGGELKNAVGAVKWATDYLLKVTAVPETVYVQVGDAFSD 360
           GFPMAFTTTM+SWS+IDFGKTMG EL+NAV A+KW TDYL+K T +P+ V+VQVGDA+SD
Sbjct: 86  GFPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSD 145

Query: 361 HNCWERPEDM 390
           HNCWERPEDM
Sbjct: 146 HNCWERPEDM 155


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