BLASTX nr result

ID: Coptis24_contig00038297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038297
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274062.2| PREDICTED: probable FKBP-type peptidyl-proly...    89   4e-16
ref|XP_004152138.1| PREDICTED: peptidyl-prolyl cis-trans isomera...    88   8e-16
ref|XP_002328028.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_003537922.1| PREDICTED: probable FKBP-type peptidyl-proly...    80   2e-13
ref|XP_003541135.1| PREDICTED: probable FKBP-type peptidyl-proly...    80   2e-13

>ref|XP_002274062.2| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           2, chloroplastic-like [Vitis vinifera]
           gi|296084250|emb|CBI24638.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 5/96 (5%)
 Frame = +1

Query: 85  PTYQAILKQRIQNSMVQCSMQEHKSVVMRDYET----DMNRVTRRDSIALLFGVSS-FVA 249
           P +Q+I   +I++  ++CS  E   VV++   T    D   + RR++I L+ GVSS FV 
Sbjct: 22  PAHQSIPGDKIRSLNIRCSNLE---VVVKSSRTGEYSDGLMLKRREAIGLVLGVSSIFVD 78

Query: 250 TLDAQGAGLPPEEKPRLCDAACEKELENVPMVTTES 357
           + DA+ AGLPPE+KPRLCD ACEKELENVPMVTTES
Sbjct: 79  SFDAKAAGLPPEDKPRLCDDACEKELENVPMVTTES 114


>ref|XP_004152138.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3,
           chloroplastic-like [Cucumis sativus]
           gi|449484749|ref|XP_004156969.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase FKBP16-3,
           chloroplastic-like [Cucumis sativus]
          Length = 227

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/96 (50%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
 Frame = +1

Query: 79  ASPTYQAILKQRIQNSMVQCSMQE--HKSVVMRDYETDMNRVTRRDSIALLFGVSSFVA- 249
           AS  +Q I   +I++ +V+C       K   M++Y  + N   RR+ I L+ G SS V  
Sbjct: 15  ASGIHQGISSDKIRSLVVRCMNANISAKEWRMKEYAKEFNLTGRREMIGLICGTSSLVID 74

Query: 250 TLDAQGAGLPPEEKPRLCDAACEKELENVPMVTTES 357
            L+A+ AGLPPE+KPRLCD ACEKE+ENVPMVTTES
Sbjct: 75  ALNAKAAGLPPEDKPRLCDDACEKEIENVPMVTTES 110


>ref|XP_002328028.1| predicted protein [Populus trichocarpa] gi|222837437|gb|EEE75816.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 7/86 (8%)
 Frame = +1

Query: 121 NSMVQCSMQEHKS--VVMRDYETDMNRVTRRDS-IALLFGVSSF--VATLD--AQGAGLP 279
           N  VQCS  E +S     R+ + D + + RRD  I L+FGVS+   + + D  A+GAGLP
Sbjct: 2   NISVQCSNLEPRSRGSRAREKKVDTSLIKRRDCVIGLVFGVSTLCNIGSFDNVAKGAGLP 61

Query: 280 PEEKPRLCDAACEKELENVPMVTTES 357
           PE+KPRLCD  CEKELENVPMVTTES
Sbjct: 62  PEDKPRLCDETCEKELENVPMVTTES 87


>ref|XP_003537922.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           2, chloroplastic-like [Glycine max]
          Length = 232

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
 Frame = +1

Query: 82  SPTY---QAILKQRIQNSMVQCSMQEHKSVVMRDYETDM-NRVTRRDSIALLFGVSS-FV 246
           SP++   Q+IL  +++  +++      KS   R+  T M N  +RRD + L  GVS  F+
Sbjct: 24  SPSFAPPQSILVDKLRRLVIKV-----KSSETRECTTAMFNANSRRDFLGLALGVSGLFI 78

Query: 247 ATLDAQGAGLPPEEKPRLCDAACEKELENVPMVTTES 357
            +LDA GAGLPPEEKP+LCD  CEKELENVP VTT S
Sbjct: 79  GSLDANGAGLPPEEKPKLCDDTCEKELENVPTVTTGS 115


>ref|XP_003541135.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           2, chloroplastic-like [Glycine max]
          Length = 232

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
 Frame = +1

Query: 88  TYQAILKQRIQNSMVQCSMQEHKSVVMRDYETDM-NRVTRRDSIALLFGVSS--FVATLD 258
           T Q+IL  +++  +V+      KS   R+  T M N  +RRD + L  GVS   F+ +LD
Sbjct: 28  TPQSILVDKLRRLVVKV-----KSSETRECTTAMFNANSRRDFLGLALGVSGGLFMGSLD 82

Query: 259 AQGAGLPPEEKPRLCDAACEKELENVPMVTTES 357
           A GAGLPPEEKP+LCD  CEKELENVP VTT S
Sbjct: 83  ANGAGLPPEEKPKLCDDTCEKELENVPTVTTGS 115


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