BLASTX nr result

ID: Coptis24_contig00038282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038282
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312657.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002315653.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
gb|AAD31066.1|AC007357_15 F3F19.15 [Arabidopsis thaliana]              93   2e-17
dbj|BAK00694.1| predicted protein [Hordeum vulgare subsp. vulgare]     93   2e-17
ref|NP_172772.2| Cellulase (glycosyl hydrolase family 5) protein...    93   2e-17

>ref|XP_002312657.1| predicted protein [Populus trichocarpa] gi|222852477|gb|EEE90024.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 5/86 (5%)
 Frame = +2

Query: 29  HRYMQQGAEAV-----DILVIMSGLEFDKNLTFLRNKQVKLSFTRKLVFEGH*YGFTDQE 193
           +RYMQ+GAEAV     D++VI+SGL +DK+L+FLRN+ V L+F+RK+VFE H YGFTD +
Sbjct: 200 YRYMQKGAEAVHSANPDVIVILSGLNYDKDLSFLRNRPVNLTFSRKIVFEVHWYGFTDGQ 259

Query: 194 NWAKHNANDCCGKFMKKMMNNFGFLL 271
            W   N N  CG+ +  MM   GFLL
Sbjct: 260 AWKNGNPNQVCGRVVDNMMRISGFLL 285


>ref|XP_002315653.1| predicted protein [Populus trichocarpa] gi|222864693|gb|EEF01824.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 5/86 (5%)
 Frame = +2

Query: 29  HRYMQQGAEAV-----DILVIMSGLEFDKNLTFLRNKQVKLSFTRKLVFEGH*YGFTDQE 193
           +RYMQ+GAEAV     D++VI+SGL +DK+L+FLRN+ V L+F+ K+VFE H YGFTD E
Sbjct: 193 YRYMQKGAEAVHSANPDVIVILSGLNYDKDLSFLRNRPVHLTFSGKIVFEVHWYGFTDGE 252

Query: 194 NWAKHNANDCCGKFMKKMMNNFGFLL 271
            W   N+N  CG+ +  MM   GFLL
Sbjct: 253 AWKSGNSNQVCGRVVDNMMRVSGFLL 278


>gb|AAD31066.1|AC007357_15 F3F19.15 [Arabidopsis thaliana]
          Length = 522

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
 Frame = +2

Query: 32  RYMQQGAEAVD-----ILVIMSGLEFDKNLTFLRNKQVKLSFTRKLVFEGH*YGFTDQEN 196
           +YMQQGAEAV      +LVI+SGL FD +L+F+R++ VKLSFT KLVFE H Y F+D  +
Sbjct: 195 KYMQQGAEAVHSANNKVLVILSGLSFDADLSFVRSRPVKLSFTGKLVFELHWYSFSDGNS 254

Query: 197 WAKHNANDCCGKFMKKMMNNFGFLL 271
           WA +N ND CG+ + ++ N  G+LL
Sbjct: 255 WAANNPNDICGRVLNRIGNGGGYLL 279


>dbj|BAK00694.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 561

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
 Frame = +2

Query: 29  HRYMQQGAEAV-----DILVIMSGLEFDKNLTFLRNKQVKLSFTRKLVFEGH*YGFTDQE 193
           +RYMQQGAEAV     ++LVI+SGL+FD +L+FL  KQVKLSFT KLVFE H YGF+D  
Sbjct: 222 YRYMQQGAEAVHAANPNVLVILSGLDFDNSLSFLSPKQVKLSFTGKLVFEQHWYGFSDGT 281

Query: 194 NWAKHNANDCCGKFMKKMMNNFGFLL 271
           +W   N ND CG+ ++ +     FLL
Sbjct: 282 DWENSNQNDACGEAVESIRTKGLFLL 307


>ref|NP_172772.2| Cellulase (glycosyl hydrolase family 5) protein [Arabidopsis
           thaliana] gi|51536480|gb|AAU05478.1| At1g13130
           [Arabidopsis thaliana] gi|332190852|gb|AEE28973.1|
           Cellulase (glycosyl hydrolase family 5) protein
           [Arabidopsis thaliana]
          Length = 552

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
 Frame = +2

Query: 32  RYMQQGAEAVD-----ILVIMSGLEFDKNLTFLRNKQVKLSFTRKLVFEGH*YGFTDQEN 196
           +YMQQGAEAV      +LVI+SGL FD +L+F+R++ VKLSFT KLVFE H Y F+D  +
Sbjct: 225 KYMQQGAEAVHSANNKVLVILSGLSFDADLSFVRSRPVKLSFTGKLVFELHWYSFSDGNS 284

Query: 197 WAKHNANDCCGKFMKKMMNNFGFLL 271
           WA +N ND CG+ + ++ N  G+LL
Sbjct: 285 WAANNPNDICGRVLNRIGNGGGYLL 309


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