BLASTX nr result
ID: Coptis24_contig00038274
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038274 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACH92945.1| unknown [Dimocarpus longan] 36 3e-06 >gb|ACH92945.1| unknown [Dimocarpus longan] Length = 203 Score = 36.2 bits (82), Expect(3) = 3e-06 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%) Frame = +3 Query: 189 WKFMSRLKEAHP-DAKVKFSE-HLLVNVSAYLNLTGRVQYN---VFLEGIYDTLIG 341 W +S +E P K +++E LL+NVSA L+L G+ N +FLEG+YD +G Sbjct: 118 WSNVSAKEEETPYHTKAQYTEKQLLLNVSAQLSLVGKSYSNFSGLFLEGLYDPHVG 173 Score = 32.3 bits (72), Expect(3) = 3e-06 Identities = 12/29 (41%), Positives = 22/29 (75%) Frame = +1 Query: 43 ILSLSRLSDELSVHLSVIMDPFTNTKSPK 129 + SLS LS++L++H+S + DPF ++ P+ Sbjct: 72 LASLSLLSEDLTLHISAVPDPFPKSRLPR 100 Score = 26.6 bits (57), Expect(3) = 3e-06 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 110 PTLSRPRTFIRMTILSFRPLFGQ 178 P PRT I+M ILS PLFG+ Sbjct: 94 PKSRLPRTDIQMEILSVGPLFGR 116