BLASTX nr result

ID: Coptis24_contig00038272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038272
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276611.1| PREDICTED: histone-lysine N-methyltransferas...   118   4e-25
emb|CAN70637.1| hypothetical protein VITISV_032039 [Vitis vinifera]   118   4e-25
emb|CBI29967.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002534573.1| protein with unknown function [Ricinus commu...   116   2e-24
ref|XP_002308346.1| SET domain protein [Populus trichocarpa] gi|...   115   3e-24

>ref|XP_002276611.1| PREDICTED: histone-lysine N-methyltransferase ATXR4-like [Vitis
           vinifera]
          Length = 327

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/107 (56%), Positives = 74/107 (69%)
 Frame = -2

Query: 323 FTYSXXXXTINANKPTQPSPPPIQVLLTESAGRGVFATRRIGAGDLIHTEKPIVSYPSQS 144
           F YS      N  K   P PPPI+V +TE AGRGVFATRRIG+GDLIHT KP+VS+PS S
Sbjct: 26  FCYSTPTPPEN-EKLASPGPPPIRVSITEMAGRGVFATRRIGSGDLIHTAKPLVSHPSLS 84

Query: 143 LVHSVCYFCLKRLGNNKDSLQGHSVKFCSNECREQAKGFYEIEERVD 3
            +HSVCYFCL++L     S +  +V+FCS EC EQ+K F  +E + D
Sbjct: 85  SIHSVCYFCLRKL-KPVTSSEDCNVRFCSQECEEQSKVFVAVERKAD 130


>emb|CAN70637.1| hypothetical protein VITISV_032039 [Vitis vinifera]
          Length = 139

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/107 (56%), Positives = 74/107 (69%)
 Frame = -2

Query: 323 FTYSXXXXTINANKPTQPSPPPIQVLLTESAGRGVFATRRIGAGDLIHTEKPIVSYPSQS 144
           F YS      N  K   P PPPI+V +TE AGRGVFATRRIG+GDLIHT KP+VS+PS S
Sbjct: 26  FCYSTPTPPEN-EKLASPGPPPIRVSITEMAGRGVFATRRIGSGDLIHTAKPLVSHPSLS 84

Query: 143 LVHSVCYFCLKRLGNNKDSLQGHSVKFCSNECREQAKGFYEIEERVD 3
            +HSVCYFCL++L     S +  +V+FCS EC EQ+K F  +E + D
Sbjct: 85  SIHSVCYFCLRKL-KPVTSSEDCNVRFCSQECEEQSKVFVAVERKAD 130


>emb|CBI29967.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/94 (59%), Positives = 70/94 (74%)
 Frame = -2

Query: 284 KPTQPSPPPIQVLLTESAGRGVFATRRIGAGDLIHTEKPIVSYPSQSLVHSVCYFCLKRL 105
           K   P PPPI+V +TE AGRGVFATRRIG+GDLIHT KP+VS+PS S +HSVCYFCL++L
Sbjct: 371 KLASPGPPPIRVSITEMAGRGVFATRRIGSGDLIHTAKPLVSHPSLSSIHSVCYFCLRKL 430

Query: 104 GNNKDSLQGHSVKFCSNECREQAKGFYEIEERVD 3
                S +  +V+FCS EC EQ+K F  +E + D
Sbjct: 431 -KPVTSSEDCNVRFCSQECEEQSKVFVAVERKAD 463


>ref|XP_002534573.1| protein with unknown function [Ricinus communis]
           gi|223524997|gb|EEF27811.1| protein with unknown
           function [Ricinus communis]
          Length = 319

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/94 (59%), Positives = 70/94 (74%)
 Frame = -2

Query: 284 KPTQPSPPPIQVLLTESAGRGVFATRRIGAGDLIHTEKPIVSYPSQSLVHSVCYFCLKRL 105
           K T  SPPPI+V +TESAGRGVF+TRRI  G+LIH  KPIVSYPS+S  ++VCYFCLK+L
Sbjct: 33  KQTLRSPPPIRVGVTESAGRGVFSTRRISGGELIHNAKPIVSYPSRSSTNTVCYFCLKKL 92

Query: 104 GNNKDSLQGHSVKFCSNECREQAKGFYEIEERVD 3
                S +  SV FCS EC++ AK FY++E + D
Sbjct: 93  A----STENRSVAFCSQECKQNAKVFYDVETKAD 122


>ref|XP_002308346.1| SET domain protein [Populus trichocarpa]
           gi|222854322|gb|EEE91869.1| SET domain protein [Populus
           trichocarpa]
          Length = 283

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/88 (61%), Positives = 69/88 (78%)
 Frame = -2

Query: 266 PPPIQVLLTESAGRGVFATRRIGAGDLIHTEKPIVSYPSQSLVHSVCYFCLKRLGNNKDS 87
           PPPI+V LTESAGRGVF+TR+I AGDLIHT KPI+++PS S +++VCYFCLK+L + +  
Sbjct: 1   PPPIRVALTESAGRGVFSTRKICAGDLIHTAKPILAHPSLSTINTVCYFCLKKLTSTE-- 58

Query: 86  LQGHSVKFCSNECREQAKGFYEIEERVD 3
             G  V FCS EC+E AK FYE+E + D
Sbjct: 59  FHGKGVAFCSQECKENAKVFYEVETKAD 86


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