BLASTX nr result

ID: Coptis24_contig00038265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038265
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279027.1| PREDICTED: uncharacterized protein LOC100262...   116   2e-24
emb|CAN68342.1| hypothetical protein VITISV_004016 [Vitis vinifera]   116   2e-24
ref|XP_002314875.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_003556793.1| PREDICTED: uncharacterized protein LOC100788...   111   7e-23
gb|AFK38715.1| unknown [Medicago truncatula]                          108   3e-22

>ref|XP_002279027.1| PREDICTED: uncharacterized protein LOC100262750 [Vitis vinifera]
           gi|297737840|emb|CBI27041.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/72 (72%), Positives = 60/72 (83%)
 Frame = -2

Query: 217 RYIGSLDALWGFQMFLTNTFLIPYMAIRLNEAEGNYSPKEPSKFGAVMISGAPIVGLVGG 38
           RY GSLD LWGFQMFLTNTFLIPYMAIRLN+ +  Y P++PS+ G+VMI GAPIVGL+GG
Sbjct: 170 RYKGSLDVLWGFQMFLTNTFLIPYMAIRLNDEDAEYIPRKPSRLGSVMIHGAPIVGLIGG 229

Query: 37  GACVISTLWALF 2
             C+IS LWA F
Sbjct: 230 AVCLISALWAFF 241


>emb|CAN68342.1| hypothetical protein VITISV_004016 [Vitis vinifera]
          Length = 349

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/72 (72%), Positives = 60/72 (83%)
 Frame = -2

Query: 217 RYIGSLDALWGFQMFLTNTFLIPYMAIRLNEAEGNYSPKEPSKFGAVMISGAPIVGLVGG 38
           RY GSLD LWGFQMFLTNTFLIPYMAIRLN+ +  Y P++PS+ G+VMI GAPIVGL+GG
Sbjct: 194 RYKGSLDVLWGFQMFLTNTFLIPYMAIRLNDEDAEYIPRKPSRLGSVMIHGAPIVGLIGG 253

Query: 37  GACVISTLWALF 2
             C+IS LWA F
Sbjct: 254 AVCLISALWAFF 265


>ref|XP_002314875.1| predicted protein [Populus trichocarpa] gi|222863915|gb|EEF01046.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/72 (70%), Positives = 61/72 (84%)
 Frame = -2

Query: 217 RYIGSLDALWGFQMFLTNTFLIPYMAIRLNEAEGNYSPKEPSKFGAVMISGAPIVGLVGG 38
           RY  SLD LWGFQMFLTNTFLIPYMAIRLNEA+ +Y+P + S+ G +M +GAP+VGL+GG
Sbjct: 99  RYRWSLDVLWGFQMFLTNTFLIPYMAIRLNEADSDYTPSKRSQLGTIMTTGAPVVGLIGG 158

Query: 37  GACVISTLWALF 2
            AC+IS LWALF
Sbjct: 159 AACLISVLWALF 170


>ref|XP_003556793.1| PREDICTED: uncharacterized protein LOC100788833 [Glycine max]
          Length = 280

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/72 (69%), Positives = 61/72 (84%)
 Frame = -2

Query: 217 RYIGSLDALWGFQMFLTNTFLIPYMAIRLNEAEGNYSPKEPSKFGAVMISGAPIVGLVGG 38
           RY GSLD LWG QMFLTNTFLIPYMAIRLN+A+    P++ S+FG+VM +GAPIVG++GG
Sbjct: 100 RYKGSLDVLWGLQMFLTNTFLIPYMAIRLNDADDESVPRKLSQFGSVMTNGAPIVGVIGG 159

Query: 37  GACVISTLWALF 2
            AC++S LWALF
Sbjct: 160 SACIVSLLWALF 171


>gb|AFK38715.1| unknown [Medicago truncatula]
          Length = 339

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/72 (68%), Positives = 60/72 (83%)
 Frame = -2

Query: 217 RYIGSLDALWGFQMFLTNTFLIPYMAIRLNEAEGNYSPKEPSKFGAVMISGAPIVGLVGG 38
           RY GSLD LWG QMFLTNTFLIPYMAIR+N A+ + +P + SK G++M +GAP+VGL+GG
Sbjct: 185 RYKGSLDVLWGLQMFLTNTFLIPYMAIRMNNADDDNAPIKNSKLGSIMTTGAPLVGLIGG 244

Query: 37  GACVISTLWALF 2
           G C+IS LWALF
Sbjct: 245 GICLISLLWALF 256


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