BLASTX nr result
ID: Coptis24_contig00038246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038246 (214 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326526.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-11 ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808... 53 2e-11 ref|XP_002527676.1| conserved hypothetical protein [Ricinus comm... 50 4e-09 ref|XP_002870079.1| hypothetical protein ARALYDRAFT_329738 [Arab... 51 2e-08 emb|CAA17132.1| putative protein [Arabidopsis thaliana] gi|72685... 48 1e-07 >ref|XP_002326526.1| predicted protein [Populus trichocarpa] gi|222833848|gb|EEE72325.1| predicted protein [Populus trichocarpa] Length = 835 Score = 57.4 bits (137), Expect(2) = 1e-11 Identities = 22/34 (64%), Positives = 28/34 (82%) Frame = +2 Query: 2 NTCFLNSILQCFNHTVPFVQSLRNWNHSSPCLLE 103 NTC++N+ILQCF HTVP VQ+LR+ NH PC+ E Sbjct: 282 NTCYINAILQCFTHTVPLVQALRSCNHEMPCITE 315 Score = 36.6 bits (83), Expect(2) = 1e-11 Identities = 17/33 (51%), Positives = 19/33 (57%) Frame = +1 Query: 103 DGFCVLCELRDHIELXXXXXXXXXXPYGFVDNL 201 +GFCVLC LRDHIEL P V+NL Sbjct: 315 EGFCVLCVLRDHIELSLSSSGKILEPLKLVNNL 347 >ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808015 [Glycine max] Length = 730 Score = 52.8 bits (125), Expect(2) = 2e-11 Identities = 22/31 (70%), Positives = 24/31 (77%) Frame = +2 Query: 2 NTCFLNSILQCFNHTVPFVQSLRNWNHSSPC 94 NTCFLN+ILQCF HTVP VQ LR+ H PC Sbjct: 131 NTCFLNAILQCFTHTVPLVQGLRSSTHLIPC 161 Score = 40.8 bits (94), Expect(2) = 2e-11 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +1 Query: 85 IPLSS-RDGFCVLCELRDHIELXXXXXXXXXXPYGFVDNLSYF 210 IP S +DGFCV+C LR H+E P FV+NL+YF Sbjct: 159 IPCSGHKDGFCVICALRIHVERSLVAPGGTLSPLKFVNNLNYF 201 >ref|XP_002527676.1| conserved hypothetical protein [Ricinus communis] gi|223532981|gb|EEF34747.1| conserved hypothetical protein [Ricinus communis] Length = 753 Score = 49.7 bits (117), Expect(2) = 4e-09 Identities = 19/31 (61%), Positives = 25/31 (80%) Frame = +2 Query: 2 NTCFLNSILQCFNHTVPFVQSLRNWNHSSPC 94 NTCF+N++LQ F HTVP V++LR+ NH PC Sbjct: 187 NTCFINAVLQSFTHTVPLVKALRSCNHVMPC 217 Score = 35.8 bits (81), Expect(2) = 4e-09 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +1 Query: 103 DGFCVLCELRDHIELXXXXXXXXXXPYGFVDNL 201 +GFC +C LRDHIEL P VDNL Sbjct: 222 EGFCAVCALRDHIELSLTSSGKAVSPSKIVDNL 254 >ref|XP_002870079.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp. lyrata] gi|297315915|gb|EFH46338.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp. lyrata] Length = 1082 Score = 51.2 bits (121), Expect(2) = 2e-08 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +2 Query: 2 NTCFLNSILQCFNHTVPFVQSLRNWNHSSPC 94 NTCFLNS+ QCF HTVP ++SLR + + PC Sbjct: 568 NTCFLNSVFQCFTHTVPLIESLRAYKYEVPC 598 Score = 32.3 bits (72), Expect(2) = 2e-08 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +1 Query: 109 FCVLCELRDHIELXXXXXXXXXXPYGFVDNLSYF 210 FCV+ LR HIE PY F++NL+YF Sbjct: 605 FCVIRALRYHIEAALRPERCPIAPYYFLNNLNYF 638 >emb|CAA17132.1| putative protein [Arabidopsis thaliana] gi|7268541|emb|CAB78791.1| putative protein [Arabidopsis thaliana] Length = 1082 Score = 47.8 bits (112), Expect(2) = 1e-07 Identities = 17/31 (54%), Positives = 24/31 (77%) Frame = +2 Query: 2 NTCFLNSILQCFNHTVPFVQSLRNWNHSSPC 94 N+CFLNS+ QCF HTVP ++SL ++ + PC Sbjct: 570 NSCFLNSVFQCFTHTVPLIESLLSFRYEVPC 600 Score = 32.7 bits (73), Expect(2) = 1e-07 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +1 Query: 109 FCVLCELRDHIELXXXXXXXXXXPYGFVDNLSYF 210 FCV+ +R HIE PY F DNL+YF Sbjct: 607 FCVIRAIRYHIEAALRPERCPIAPYFFFDNLNYF 640