BLASTX nr result
ID: Coptis24_contig00038229
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038229 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311869.1| predicted protein [Populus trichocarpa] gi|2... 131 6e-29 ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containi... 127 7e-28 emb|CBI32045.3| unnamed protein product [Vitis vinifera] 127 7e-28 ref|XP_002520167.1| pentatricopeptide repeat-containing protein,... 125 3e-27 ref|XP_003630933.1| Tau class glutathione S-transferase [Medicag... 114 8e-24 >ref|XP_002311869.1| predicted protein [Populus trichocarpa] gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa] Length = 470 Score = 131 bits (329), Expect = 6e-29 Identities = 59/89 (66%), Positives = 78/89 (87%) Frame = -1 Query: 272 LVLCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVI 93 L+LCK+ KV +AERVLREM++ G+V D +VYTTLIDGFCK+GN+ AAY+LF EM+ +R++ Sbjct: 53 LLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV 112 Query: 92 PDTIAYTAVICGLCRSGKMVEANRFFDEM 6 PD IAYTAVICGLCR GKM+EA++ F++M Sbjct: 113 PDFIAYTAVICGLCRCGKMMEADKVFNKM 141 Score = 78.6 bits (192), Expect = 5e-13 Identities = 35/87 (40%), Positives = 55/87 (63%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LC+ K++EA++V +M S G+ D + YTTLIDG+CK G + A+ L ++M + P+ Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + YTA+ GLC+ G++ AN EM Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEM 211 Score = 70.1 bits (170), Expect = 2e-10 Identities = 33/87 (37%), Positives = 52/87 (59%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK +V A +L EM G+ L+ Y +L++G CK GN+ A +L EM+ + PD Sbjct: 195 LCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPD 254 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 TI +T ++ C++G+MV+A+ EM Sbjct: 255 TITFTTLMDAYCKTGEMVKAHELLREM 281 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/82 (35%), Positives = 46/82 (56%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK+ + +A +++ EM GM D I +TTL+D +CK G + A+ L EM R + P Sbjct: 230 LCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289 Query: 86 TIAYTAVICGLCRSGKMVEANR 21 I + ++ G C SG + + R Sbjct: 290 VITFNVLMNGFCMSGMLEDGER 311 Score = 58.5 bits (140), Expect = 5e-07 Identities = 27/86 (31%), Positives = 49/86 (56%) Frame = -1 Query: 263 CKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPDT 84 C ++ + ++++EM G+ + Y ++I CK G + A R+ EM ++ ++PDT Sbjct: 21 CLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDT 80 Query: 83 IAYTAVICGLCRSGKMVEANRFFDEM 6 + YT +I G C+ G + A + FDEM Sbjct: 81 VVYTTLIDGFCKLGNIQAAYKLFDEM 106 Score = 56.6 bits (135), Expect = 2e-06 Identities = 26/86 (30%), Positives = 49/86 (56%) Frame = -1 Query: 263 CKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPDT 84 CK+ ++ +A + +M+ G+ + + YT L DG CK+G + A L EM + + + Sbjct: 161 CKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNI 220 Query: 83 IAYTAVICGLCRSGKMVEANRFFDEM 6 Y +++ GLC+SG + +A + +EM Sbjct: 221 CTYNSLVNGLCKSGNIRQAVKLMEEM 246 >ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Vitis vinifera] Length = 748 Score = 127 bits (320), Expect = 7e-28 Identities = 57/89 (64%), Positives = 74/89 (83%) Frame = -1 Query: 272 LVLCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVI 93 L+LCK KV EAERVLREM+S G+ D ++YTTLIDGFCK+GN+ +AYRLF EMQ R++ Sbjct: 331 LLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS 390 Query: 92 PDTIAYTAVICGLCRSGKMVEANRFFDEM 6 PD I YTAVICGLC++G+++EA++ F EM Sbjct: 391 PDFITYTAVICGLCQTGRVMEADKLFHEM 419 Score = 73.2 bits (178), Expect = 2e-11 Identities = 32/87 (36%), Positives = 53/87 (60%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LC+ +V+EA+++ EM+ + D + YT LIDG+CK G + A+ L ++M + P+ Sbjct: 403 LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + YTA+ GLC+ G++ AN EM Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHEM 489 Score = 72.8 bits (177), Expect = 3e-11 Identities = 36/87 (41%), Positives = 54/87 (62%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LC+ +VVEA ++L +M G + D I Y+T+I+G+C+VG L +L EMQ + + P+ Sbjct: 263 LCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPN 322 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 Y VI LC++GK+ EA R EM Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLREM 349 Score = 63.9 bits (154), Expect = 1e-08 Identities = 30/87 (34%), Positives = 48/87 (55%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK +V A +L EM G+ L+ Y +L++G CK GN+ A +L +M+ PD Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + YT ++ C+S +MV A+ +M Sbjct: 533 AVTYTTLMDAYCKSREMVRAHELLRQM 559 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/86 (30%), Positives = 46/86 (53%) Frame = -1 Query: 263 CKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPDT 84 CK K+ EA + +M+ G+ + + YT L DG CK G + A L EM + + + Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498 Query: 83 IAYTAVICGLCRSGKMVEANRFFDEM 6 Y +++ GLC++G + +A + +M Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDM 524 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/87 (27%), Positives = 45/87 (51%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK + +A +++++M G D + YTTL+D +CK + A+ L +M R + P Sbjct: 508 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + + ++ G C SG + + + M Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWM 594 >emb|CBI32045.3| unnamed protein product [Vitis vinifera] Length = 648 Score = 127 bits (320), Expect = 7e-28 Identities = 57/89 (64%), Positives = 74/89 (83%) Frame = -1 Query: 272 LVLCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVI 93 L+LCK KV EAERVLREM+S G+ D ++YTTLIDGFCK+GN+ +AYRLF EMQ R++ Sbjct: 231 LLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS 290 Query: 92 PDTIAYTAVICGLCRSGKMVEANRFFDEM 6 PD I YTAVICGLC++G+++EA++ F EM Sbjct: 291 PDFITYTAVICGLCQTGRVMEADKLFHEM 319 Score = 73.2 bits (178), Expect = 2e-11 Identities = 32/87 (36%), Positives = 53/87 (60%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LC+ +V+EA+++ EM+ + D + YT LIDG+CK G + A+ L ++M + P+ Sbjct: 303 LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 362 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + YTA+ GLC+ G++ AN EM Sbjct: 363 IVTYTALADGLCKCGEVDTANELLHEM 389 Score = 63.9 bits (154), Expect = 1e-08 Identities = 30/87 (34%), Positives = 48/87 (55%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK +V A +L EM G+ L+ Y +L++G CK GN+ A +L +M+ PD Sbjct: 373 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 432 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + YT ++ C+S +MV A+ +M Sbjct: 433 AVTYTTLMDAYCKSREMVRAHELLRQM 459 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/86 (30%), Positives = 46/86 (53%) Frame = -1 Query: 263 CKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPDT 84 CK K+ EA + +M+ G+ + + YT L DG CK G + A L EM + + + Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398 Query: 83 IAYTAVICGLCRSGKMVEANRFFDEM 6 Y +++ GLC++G + +A + +M Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDM 424 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/87 (27%), Positives = 45/87 (51%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK + +A +++++M G D + YTTL+D +CK + A+ L +M R + P Sbjct: 408 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 467 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + + ++ G C SG + + + M Sbjct: 468 VVTFNVLMNGFCMSGMLEDGEKLLKWM 494 >ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 604 Score = 125 bits (315), Expect = 3e-27 Identities = 56/89 (62%), Positives = 77/89 (86%) Frame = -1 Query: 272 LVLCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVI 93 L+LCK+ KVVE E+VLREMM G+ D+++YTTLIDGFCK+GN AAY+LFSEM++R ++ Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247 Query: 92 PDTIAYTAVICGLCRSGKMVEANRFFDEM 6 PD+IA++A+ICGL SGK+VEA++ F+EM Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEM 276 Score = 75.9 bits (185), Expect = 3e-12 Identities = 35/87 (40%), Positives = 54/87 (62%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 L + KVVEA+++ EM+ G D + YT LIDG+CK+G + A+ L ++M + P+ Sbjct: 260 LSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPN 319 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + YTA+ GLC+SG++ AN EM Sbjct: 320 VVTYTALADGLCKSGELDTANELLHEM 346 Score = 68.2 bits (165), Expect = 7e-10 Identities = 33/82 (40%), Positives = 49/82 (59%) Frame = -1 Query: 251 KVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPDTIAYT 72 K+ EA +L M G + D + YTT+IDG+C VG L +L EMQ + + P+ Y+ Sbjct: 125 KIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYS 184 Query: 71 AVICGLCRSGKMVEANRFFDEM 6 ++I LC+SGK+VE + EM Sbjct: 185 SIILLLCKSGKVVEGEKVLREM 206 Score = 67.4 bits (163), Expect = 1e-09 Identities = 32/87 (36%), Positives = 51/87 (58%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK+ ++ A +L EM G+ L+ Y T+++G CK GN+ A +L EM+ + PD Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 TI YT ++ ++G+MV+A EM Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREM 416 Score = 63.2 bits (152), Expect = 2e-08 Identities = 30/87 (34%), Positives = 47/87 (54%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK +++A +++ EM G+ D I YTTL+D + K G + A L EM R + P Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPT 424 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + + ++ GLC SGK+ + R M Sbjct: 425 VVTFNVLMNGLCMSGKLEDGERLLKWM 451 >ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula] gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula] Length = 1320 Score = 114 bits (285), Expect = 8e-24 Identities = 51/89 (57%), Positives = 71/89 (79%) Frame = -1 Query: 272 LVLCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVI 93 L+LCKN +VVEAE++LR M G+ DN+VYTT+I GFCK+GN+ AA +LF EM+ ++++ Sbjct: 320 LLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIV 379 Query: 92 PDTIAYTAVICGLCRSGKMVEANRFFDEM 6 PD + YT+VI G+C+SGKMVEA F+EM Sbjct: 380 PDIVTYTSVIHGICKSGKMVEAREMFNEM 408 Score = 78.6 bits (192), Expect = 5e-13 Identities = 33/87 (37%), Positives = 55/87 (63%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 +CK+ K+VEA + EM+ G+ D + YT LIDG+CK G + A+ + ++M + + P+ Sbjct: 392 ICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPN 451 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + YTA+ GLC++G++ AN EM Sbjct: 452 VVTYTALADGLCKNGEIDVANELLHEM 478 Score = 65.9 bits (159), Expect = 3e-09 Identities = 29/81 (35%), Positives = 46/81 (56%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCKN ++ A +L EM G+ + Y T+++G CK+GN+ +L EM PD Sbjct: 462 LCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521 Query: 86 TIAYTAVICGLCRSGKMVEAN 24 TI YT ++ C+ G+M +A+ Sbjct: 522 TITYTTLMDAYCKMGEMAKAH 542 Score = 61.6 bits (148), Expect = 6e-08 Identities = 29/88 (32%), Positives = 49/88 (55%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LC+ KV EA +L +M G D + Y ++ G+C++G L +L E++ + + PD Sbjct: 252 LCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPD 311 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEMR 3 Y +I LC++G++VEA + MR Sbjct: 312 EYIYNNIILLLCKNGEVVEAEQLLRGMR 339 Score = 60.8 bits (146), Expect = 1e-07 Identities = 27/87 (31%), Positives = 47/87 (54%) Frame = -1 Query: 266 LCKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPD 87 LCK + + +++ EM G D I YTTL+D +CK+G + A+ L M ++R+ P Sbjct: 497 LCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556 Query: 86 TIAYTAVICGLCRSGKMVEANRFFDEM 6 + + ++ G C SG + + R + M Sbjct: 557 LVTFNVLMNGFCMSGMLEDGERLIEWM 583 Score = 58.9 bits (141), Expect = 4e-07 Identities = 27/86 (31%), Positives = 45/86 (52%) Frame = -1 Query: 263 CKNDKVVEAERVLREMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPDT 84 CK ++ EA V +M+ G+ + + YT L DG CK G + A L EM + + P+ Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487 Query: 83 IAYTAVICGLCRSGKMVEANRFFDEM 6 Y ++ GLC+ G + + + +EM Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEM 513 Score = 56.6 bits (135), Expect = 2e-06 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Frame = -1 Query: 251 KVVEAERVLR---EMMSHGMVLDNIVYTTLIDGFCKVGNLPAAYRLFSEMQSRRVIPDTI 81 ++ E ++VL+ E+ G+ D +Y +I CK G + A +L M+ V PD + Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348 Query: 80 AYTAVICGLCRSGKMVEANRFFDEMR 3 YT VI G C+ G + A + FDEMR Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMR 374