BLASTX nr result

ID: Coptis24_contig00038227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038227
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31844.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002274961.1| PREDICTED: traB domain-containing protein-li...   151   5e-35
emb|CAN73376.1| hypothetical protein VITISV_019101 [Vitis vinifera]   150   1e-34
ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|NP_001062417.2| Os08g0545700 [Oryza sativa Japonica Group] g...   138   4e-31

>emb|CBI31844.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  151 bits (382), Expect = 5e-35
 Identities = 76/101 (75%), Positives = 89/101 (88%)
 Frame = -1

Query: 304 LALRLLLAVFSSKISSDANRPFGDEFRAARKAAEDIGAQLVLGDRPIEITLERAWKSLNW 125
           LALRLLLAVFSSKISSD NRPFGDEFRAARKA+E +GAQ+VLGDRPIEITLERAW SL W
Sbjct: 176 LALRLLLAVFSSKISSDVNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEW 235

Query: 124 NEKLGLVVSVFRGITAQSSDISTSKFKDLEKDESPFRLYEK 2
           NEKL LV+SV RGIT  SS++ST++ K+L  D+S F+LY++
Sbjct: 236 NEKLSLVISVIRGIT--SSELSTNEMKELSTDDSTFQLYDQ 274


>ref|XP_002274961.1| PREDICTED: traB domain-containing protein-like [Vitis vinifera]
          Length = 385

 Score =  151 bits (382), Expect = 5e-35
 Identities = 76/101 (75%), Positives = 89/101 (88%)
 Frame = -1

Query: 304 LALRLLLAVFSSKISSDANRPFGDEFRAARKAAEDIGAQLVLGDRPIEITLERAWKSLNW 125
           LALRLLLAVFSSKISSD NRPFGDEFRAARKA+E +GAQ+VLGDRPIEITLERAW SL W
Sbjct: 181 LALRLLLAVFSSKISSDVNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEW 240

Query: 124 NEKLGLVVSVFRGITAQSSDISTSKFKDLEKDESPFRLYEK 2
           NEKL LV+SV RGIT  SS++ST++ K+L  D+S F+LY++
Sbjct: 241 NEKLSLVISVIRGIT--SSELSTNEMKELSTDDSTFQLYDQ 279


>emb|CAN73376.1| hypothetical protein VITISV_019101 [Vitis vinifera]
          Length = 364

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/101 (75%), Positives = 88/101 (87%)
 Frame = -1

Query: 304 LALRLLLAVFSSKISSDANRPFGDEFRAARKAAEDIGAQLVLGDRPIEITLERAWKSLNW 125
           LALRLLLAVFSSKISSD NRPFGDEFRAARKA+E +GAQ+VLGDRPIEITLERAW SL W
Sbjct: 160 LALRLLLAVFSSKISSDVNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEW 219

Query: 124 NEKLGLVVSVFRGITAQSSDISTSKFKDLEKDESPFRLYEK 2
           NEKL LV+SV RGIT  SS++ST++ K L  D+S F+LY++
Sbjct: 220 NEKLSLVISVIRGIT--SSELSTNEMKXLSTDDSTFQLYDQ 258


>ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|222858926|gb|EEE96473.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/101 (74%), Positives = 85/101 (84%)
 Frame = -1

Query: 304 LALRLLLAVFSSKISSDANRPFGDEFRAARKAAEDIGAQLVLGDRPIEITLERAWKSLNW 125
           LALRLLLA+FSSKISSD NRPFGDEFRAARK AE+IGAQ+VLGDRPIEITLERAW SL W
Sbjct: 41  LALRLLLALFSSKISSDVNRPFGDEFRAARKVAEEIGAQIVLGDRPIEITLERAWNSLKW 100

Query: 124 NEKLGLVVSVFRGITAQSSDISTSKFKDLEKDESPFRLYEK 2
            EKL LV++V RGIT+ SSDIS + FK    D+  F+LYE+
Sbjct: 101 REKLSLVIAVVRGITS-SSDISKNNFKASSTDDRTFQLYEQ 140


>ref|NP_001062417.2| Os08g0545700 [Oryza sativa Japonica Group]
           gi|255678621|dbj|BAF24331.2| Os08g0545700 [Oryza sativa
           Japonica Group]
          Length = 345

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/101 (72%), Positives = 84/101 (83%)
 Frame = -1

Query: 304 LALRLLLAVFSSKISSDANRPFGDEFRAARKAAEDIGAQLVLGDRPIEITLERAWKSLNW 125
           LALRLLLAVFSSKISS ANRPFG+EFRAARK +ED+GAQLVLGDRPIEITLERAWKSL+W
Sbjct: 148 LALRLLLAVFSSKISSGANRPFGEEFRAARKVSEDLGAQLVLGDRPIEITLERAWKSLSW 207

Query: 124 NEKLGLVVSVFRGITAQSSDISTSKFKDLEKDESPFRLYEK 2
           +EK  LVVS+FRGIT+     +T   +D +   SP+ LYEK
Sbjct: 208 DEKTKLVVSLFRGITS-----TTDTSQDEKAAGSPYELYEK 243


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