BLASTX nr result

ID: Coptis24_contig00038181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038181
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519679.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002270115.2| PREDICTED: uncharacterized protein LOC100263...    60   2e-07
emb|CBI30908.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002306002.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002519679.1| conserved hypothetical protein [Ricinus communis]
           gi|223541096|gb|EEF42652.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/89 (38%), Positives = 51/89 (57%)
 Frame = -3

Query: 268 ILEQVNAGLNFKILAYKSQIEQAEINYNKSAHQFRVLXXXXXXXXXXXXXXXKFYEMKVC 89
           IL++  A  NF+ILA KS+I++ +  Y   +HQ RVL               +FYE+K  
Sbjct: 55  ILDRNIAFQNFRILALKSEIQKLDTKYQADSHQLRVLKSEMEELERVEKEKERFYELKHN 114

Query: 88  EMTGFKERVERRVFELRQQVQEIKKSIDE 2
           EMT F++ VE  V E R++V E+K  ++E
Sbjct: 115 EMTAFRKNVEDFVSESRKRVNELKNQVNE 143


>ref|XP_002270115.2| PREDICTED: uncharacterized protein LOC100263531 [Vitis vinifera]
          Length = 205

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/90 (38%), Positives = 47/90 (52%)
 Frame = -3

Query: 271 LILEQVNAGLNFKILAYKSQIEQAEINYNKSAHQFRVLXXXXXXXXXXXXXXXKFYEMKV 92
           L+LEQ  A  NFKI A +S+IE     YN    Q RVL               +FY +K 
Sbjct: 54  LVLEQKIASQNFKISATRSEIESLVSKYNLDLQQLRVLKSEVCELEELENEKERFYGLKE 113

Query: 91  CEMTGFKERVERRVFELRQQVQEIKKSIDE 2
            EM  F  +VER V E R+QV+E++  ++E
Sbjct: 114 SEMKEFNAQVERFVLECRKQVEELRNRLNE 143


>emb|CBI30908.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/90 (38%), Positives = 47/90 (52%)
 Frame = -3

Query: 271 LILEQVNAGLNFKILAYKSQIEQAEINYNKSAHQFRVLXXXXXXXXXXXXXXXKFYEMKV 92
           L+LEQ  A  NFKI A +S+IE     YN    Q RVL               +FY +K 
Sbjct: 54  LVLEQKIASQNFKISATRSEIESLVSKYNLDLQQLRVLKSEVCELEELENEKERFYGLKE 113

Query: 91  CEMTGFKERVERRVFELRQQVQEIKKSIDE 2
            EM  F  +VER V E R+QV+E++  ++E
Sbjct: 114 SEMKEFNAQVERFVLECRKQVEELRNRLNE 143


>ref|XP_002306002.1| predicted protein [Populus trichocarpa] gi|222848966|gb|EEE86513.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/90 (34%), Positives = 47/90 (52%)
 Frame = -3

Query: 271 LILEQVNAGLNFKILAYKSQIEQAEINYNKSAHQFRVLXXXXXXXXXXXXXXXKFYEMKV 92
           L+L    A  NFKIL  KS+IE  +  Y+  + +FRVL               +FY++K 
Sbjct: 54  LVLVHKIAFQNFKILVLKSEIESLDAKYDPDSQEFRVLKSEVEEIEEKEKEKERFYQVKG 113

Query: 91  CEMTGFKERVERRVFELRQQVQEIKKSIDE 2
            +M  F E V++ V E R QV E++  ++E
Sbjct: 114 LDMKAFSENVDKFVKESRIQVNELRNRVNE 143


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