BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038177
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              176   5e-42
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   176   5e-42
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   152   6e-35

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  176 bits (445), Expect = 5e-42
 Identities = 94/223 (42%), Positives = 132/223 (59%)
 Frame = -2

Query: 674  ILVKDKMICRGQNLSLPAYSALIKGLCLSRSYARKAIFLFEEFPELAYQLDQETLNSVVR 495
            ++V D+M+  GQ LSL A+SAL++GLC S    +    L E+ P+L  Q+D+ETLN +V+
Sbjct: 568  MMVVDEMVRWGQELSLSAFSALLEGLCASHFSIKAVTGLLEKMPKLVNQVDEETLNLLVQ 627

Query: 494  VISKREVAFKGMRVLAGMLHRSFSIDNETFTVXXXXXXXXXCQKEIRKCWELALTHKWLP 315
               K+    KG  +L GML R  S+ +ET+             + IR CW+LA   KWL 
Sbjct: 628  THCKKGFIGKGKIILNGMLQRHLSVKSETYVALLAGLCKKGNSRTIRCCWDLARRDKWLL 687

Query: 314  CLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAVVFL 135
             LKDCK L  CLCQQ  L+EAL+L E+ML    H   D+ N+F E L   G    A   +
Sbjct: 688  ELKDCKVLVGCLCQQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVVGFTTIAHALV 747

Query: 134  DEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNI 6
            DE ++Q  +L  +A+SH++SG CKEK F EAF + ++M  KN+
Sbjct: 748  DEFLQQGCILDHTAHSHLISGFCKEKRFSEAFTIFESMQAKNL 790


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score =  176 bits (445), Expect = 5e-42
 Identities = 94/223 (42%), Positives = 132/223 (59%)
 Frame = -2

Query: 674  ILVKDKMICRGQNLSLPAYSALIKGLCLSRSYARKAIFLFEEFPELAYQLDQETLNSVVR 495
            ++V D+M+  GQ LSL A+SAL++GLC S    +    L E+ P+L  Q+D+ETLN +V+
Sbjct: 585  MMVVDEMVRWGQELSLSAFSALLEGLCASHFSIKAVTGLLEKMPKLVNQVDEETLNLLVQ 644

Query: 494  VISKREVAFKGMRVLAGMLHRSFSIDNETFTVXXXXXXXXXCQKEIRKCWELALTHKWLP 315
               K+    KG  +L GML R  S+ +ET+             + IR CW+LA   KWL 
Sbjct: 645  THCKKGFIGKGKIILNGMLQRHLSVKSETYVALLAGLCKKGNSRTIRCCWDLARRDKWLL 704

Query: 314  CLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAVVFL 135
             LKDCK L  CLCQQ  L+EAL+L E+ML    H   D+ N+F E L   G    A   +
Sbjct: 705  ELKDCKVLVGCLCQQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVVGFTTIAHALV 764

Query: 134  DEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNI 6
            DE ++Q  +L  +A+SH++SG CKEK F EAF + ++M  KN+
Sbjct: 765  DEFLQQGCILDHTAHSHLISGFCKEKRFSEAFTIFESMQAKNL 807


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
            predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  167 bits (423), Expect = 2e-39
 Identities = 89/213 (41%), Positives = 127/213 (59%)
 Frame = -2

Query: 644  GQNLSLPAYSALIKGLCLSRSYARKAIFLFEEFPELAYQLDQETLNSVVRVISKREVAFK 465
            GQ LSL   SAL+KGLC  RSY +    L E+ P+L  QLDQE LN +V+   K  +  K
Sbjct: 480  GQELSLSVVSALLKGLCTPRSYIKLCSSLLEKMPKLVNQLDQEVLNLLVQAYCKIGLTHK 539

Query: 464  GMRVLAGMLHRSFSIDNETFTVXXXXXXXXXCQKEIRKCWELALTHKWLPCLKDCKALWD 285
            G  +   ML R+ +I++ETFT            + +  CW+ AL  KWLP L DC ++ +
Sbjct: 540  GWLIFNQMLQRNLTINSETFTALIKGLCKKENLRNLHDCWDFALNGKWLPGLVDCISVVE 599

Query: 284  CLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAVVFLDEVVRQRELL 105
            CLC  GML+E L+L E MLV +  S   + +IF E LS +G +  A +F++E+++    L
Sbjct: 600  CLCHCGMLKEVLELLERMLVLNPESRLKVLHIFLEKLSLTGFSSIAHLFVEELLQHGCAL 659

Query: 104  SDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNI 6
               AYSH++ GLCKE+ ++ AF VLD ML + +
Sbjct: 660  DQIAYSHLIKGLCKEQKYKVAFAVLDIMLARKM 692


>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Glycine max]
          Length = 1186

 Score =  156 bits (395), Expect = 3e-36
 Identities = 87/224 (38%), Positives = 132/224 (58%)
 Frame = -2

Query: 674  ILVKDKMICRGQNLSLPAYSALIKGLCLSRSYARKAIFLFEEFPELAYQLDQETLNSVVR 495
            +++ ++M+C GQ L  P +S L++ LC SRS  +    L E+ P+ A++LD ETLN VV+
Sbjct: 502  LVLVEEMLCWGQELLFPEFSNLVRQLCSSRSQIKSMTKLLEQMPKSAHKLDPETLNLVVQ 561

Query: 494  VISKREVAFKGMRVLAGMLHRSFSIDNETFTVXXXXXXXXXCQKEIRKCWELALTHKWLP 315
              SK+ + FK   +L GML   F + NET+T            K+    W++A  +KWLP
Sbjct: 562  AYSKKGLLFKAKIILDGMLQNEFHVKNETYTAILMPLCKKGNMKDFSYYWDVACRNKWLP 621

Query: 314  CLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAVVFL 135
             L+D K L   +C   ML+EA Q  E ML++  +  SDI ++F EVLS +G A  A+V L
Sbjct: 622  SLEDFKCLLVHICHWKMLKEASQFLEIMLLSYPYLKSDICHVFLEVLSSTGLADTALVVL 681

Query: 134  DEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIA 3
             + ++    L  + Y+H++ GLC E  F  AF VLD ML++++A
Sbjct: 682  KQ-LQPCFNLDHTDYNHLIRGLCNEGKFSLAFTVLDDMLDRSLA 724


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  152 bits (384), Expect = 6e-35
 Identities = 81/223 (36%), Positives = 129/223 (57%)
 Frame = -2

Query: 674  ILVKDKMICRGQNLSLPAYSALIKGLCLSRSYARKAIFLFEEFPELAYQLDQETLNSVVR 495
            +L+ D+M   GQ LSL   +AL++GLC SRS+ R  I L E+ P+LA QLD E LN +V+
Sbjct: 506  LLLIDEMFRWGQELSLSVLAALVRGLCASRSHIRACIHLIEKMPKLANQLDDEVLNLLVQ 565

Query: 494  VISKREVAFKGMRVLAGMLHRSFSIDNETFTVXXXXXXXXXCQKEIRKCWELALTHKWLP 315
               K  + + G  +   ML +   I+N T+T            + +R CW++A   KWLP
Sbjct: 566  ACCKSGLMYHGRLIFHQMLLKDVIIENGTYTALIVGLCKRGDLQAVRDCWDIAQNSKWLP 625

Query: 314  CLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAVVFL 135
             LKDCK+L  CLC   M++  ++L E+M+V   H  ++I ++F E LS +G    A   +
Sbjct: 626  ELKDCKSLVGCLCYHRMVKGVIELLESMMVFYPHLRAEIFHMFLEELSITGFTSIAHKLV 685

Query: 134  DEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNI 6
            DE+++Q  +  +  YS+++ GLCKE+ +  A  +   +L +N+
Sbjct: 686  DELLQQGCVFDNVVYSYLLRGLCKERKYIAASTMAGEVLARNL 728