BLASTX nr result

ID: Coptis24_contig00038176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038176
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593345.1| Nicotiana tabacum ORF [Medicago truncatula] ...   167   8e-40
ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260...   167   1e-39
emb|CBI25071.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002522036.1| conserved hypothetical protein [Ricinus comm...   159   3e-37

>ref|XP_003593345.1| Nicotiana tabacum ORF [Medicago truncatula]
           gi|355482393|gb|AES63596.1| Nicotiana tabacum ORF
           [Medicago truncatula]
          Length = 415

 Score =  167 bits (423), Expect = 8e-40
 Identities = 83/102 (81%), Positives = 91/102 (89%), Gaps = 2/102 (1%)
 Frame = -2

Query: 300 KLLEDVSRWEYVDLPIF-ISEENGLVEREIKEAG-PVLAPFQLAGPMELWIQDGKDMRVS 127
           KLLED  RW+YVDLPIF + EENGLVE+ +   G PVLAPFQLAGPME+W+QD KDMR+S
Sbjct: 79  KLLEDTKRWDYVDLPIFRVEEENGLVEKRVDGNGLPVLAPFQLAGPMEIWVQDAKDMRLS 138

Query: 126 LPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPLDLPLPLN 1
           LPHDVDAGVLKKV+LADGAVVTVKGARSVSLRHPL LPLPLN
Sbjct: 139 LPHDVDAGVLKKVVLADGAVVTVKGARSVSLRHPLTLPLPLN 180


>ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260026 [Vitis vinifera]
          Length = 444

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 3/104 (2%)
 Frame = -2

Query: 303 LKLLEDVSRWEYVDLPIFISE---ENGLVEREIKEAGPVLAPFQLAGPMELWIQDGKDMR 133
           +KLLEDV+RWEYVDLPIF  +   ENGLV R+ ++  PVLAPFQLAGPMELWIQD KDMR
Sbjct: 86  IKLLEDVNRWEYVDLPIFRVDQDNENGLVPRKSEKRLPVLAPFQLAGPMELWIQDAKDMR 145

Query: 132 VSLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPLDLPLPLN 1
           +SLPHDVDAG LKKVILADGAVVTVKGARSVSLRHP+DLPLP N
Sbjct: 146 ISLPHDVDAGELKKVILADGAVVTVKGARSVSLRHPIDLPLPFN 189


>emb|CBI25071.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 3/104 (2%)
 Frame = -2

Query: 303 LKLLEDVSRWEYVDLPIFISE---ENGLVEREIKEAGPVLAPFQLAGPMELWIQDGKDMR 133
           +KLLEDV+RWEYVDLPIF  +   ENGLV R+ ++  PVLAPFQLAGPMELWIQD KDMR
Sbjct: 142 IKLLEDVNRWEYVDLPIFRVDQDNENGLVPRKSEKRLPVLAPFQLAGPMELWIQDAKDMR 201

Query: 132 VSLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPLDLPLPLN 1
           +SLPHDVDAG LKKVILADGAVVTVKGARSVSLRHP+DLPLP N
Sbjct: 202 ISLPHDVDAGELKKVILADGAVVTVKGARSVSLRHPIDLPLPFN 245


>ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|222850354|gb|EEE87901.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  166 bits (419), Expect = 2e-39
 Identities = 86/108 (79%), Positives = 94/108 (87%), Gaps = 8/108 (7%)
 Frame = -2

Query: 300 KLLEDVSRWEYVDLPIFISE-------ENGLVEREIKEAG-PVLAPFQLAGPMELWIQDG 145
           KLLEDV+RWE+VDLPIF  E       ENGLVE++  + G PVLAPFQLAGPME+WIQD 
Sbjct: 91  KLLEDVNRWEFVDLPIFRVEDPIRPGDENGLVEQKKDDNGSPVLAPFQLAGPMEIWIQDA 150

Query: 144 KDMRVSLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPLDLPLPLN 1
           KDMR+SLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHP+DLPLPLN
Sbjct: 151 KDMRISLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPVDLPLPLN 198


>ref|XP_002522036.1| conserved hypothetical protein [Ricinus communis]
           gi|223538635|gb|EEF40236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/112 (72%), Positives = 91/112 (81%), Gaps = 12/112 (10%)
 Frame = -2

Query: 300 KLLEDVSRWEYVDLPIF----------ISEENGLVEREIKEAG--PVLAPFQLAGPMELW 157
           KLLEDV+RWEYVDLPIF          + +EN LVE++ K     PVLAPFQLAGPME+W
Sbjct: 88  KLLEDVNRWEYVDLPIFRVEEEEGSVRVGDENTLVEKKGKSDNGLPVLAPFQLAGPMEIW 147

Query: 156 IQDGKDMRVSLPHDVDAGVLKKVILADGAVVTVKGARSVSLRHPLDLPLPLN 1
           +QD K+MR+SLPHDVDAGVLKKVILADGA VTVKGARSVSLRHP+DLPLP N
Sbjct: 148 VQDAKNMRISLPHDVDAGVLKKVILADGAAVTVKGARSVSLRHPIDLPLPFN 199


Top