BLASTX nr result

ID: Coptis24_contig00038138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038138
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32470.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002330271.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
ref|XP_003520174.1| PREDICTED: uncharacterized protein LOC100809...   141   5e-32
ref|XP_002521833.1| ATP binding protein, putative [Ricinus commu...   127   1e-27
ref|XP_003579214.1| PREDICTED: uncharacterized protein LOC100844...   126   2e-27

>emb|CBI32470.3| unnamed protein product [Vitis vinifera]
          Length = 2686

 Score =  167 bits (422), Expect = 1e-39
 Identities = 88/133 (66%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
 Frame = -2

Query: 397  KQEKNAAKTRGSGSPFKCIGLGLTQQINSEKNXXXXXXXXXXXXXXXEVVSQKKEVFMLH 218
            K EKNA+K+RGSGSPFKCIGLGL QQI  EK+                  S++KE+F L+
Sbjct: 2286 KSEKNASKSRGSGSPFKCIGLGLVQQIKLEKDEELFAGRLRIEELEALAASRQKEIFALN 2345

Query: 217  ARLAAAESMTHDVIRDLLGVKLDMTNYASLLDNQQVQKITKKAQVYS-ESPVKEQGFIQL 41
            ARLAA ESMTHDVIRDLLG+KLDMT Y S+LDNQQVQKIT+KAQ++S ES  KEQ  I+L
Sbjct: 2346 ARLAATESMTHDVIRDLLGLKLDMTKYTSVLDNQQVQKITEKAQLHSIESQAKEQEVIKL 2405

Query: 40   KQQLNEFIEERQG 2
            KQQLNEF+EERQG
Sbjct: 2406 KQQLNEFVEERQG 2418


>ref|XP_002330271.1| predicted protein [Populus trichocarpa] gi|222871306|gb|EEF08437.1|
            predicted protein [Populus trichocarpa]
          Length = 2731

 Score =  161 bits (408), Expect = 5e-38
 Identities = 87/133 (65%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
 Frame = -2

Query: 397  KQEKNAAKTRGSGSPFKCIGLGLTQQINSEKNXXXXXXXXXXXXXXXEVVSQKKEVFMLH 218
            K EKNAAK+RGS SPFKCIGLGL QQI SEK+                 V+++KE+F L+
Sbjct: 2399 KSEKNAAKSRGSSSPFKCIGLGLAQQIKSEKDEDLASARLRIEELESLAVNRQKEIFALN 2458

Query: 217  ARLAAAESMTHDVIRDLLGVKLDMTNYASLLDNQQVQKITKKAQVYSESP-VKEQGFIQL 41
            ARLAAAESMTHDVIRDLLGVKLDMTNY SLLD++QVQKI +KAQ+ +  P VK+Q  I+L
Sbjct: 2459 ARLAAAESMTHDVIRDLLGVKLDMTNYVSLLDDKQVQKIAEKAQLGTFEPHVKDQEIIKL 2518

Query: 40   KQQLNEFIEERQG 2
            KQQLN FIEER+G
Sbjct: 2519 KQQLNGFIEERRG 2531


>ref|XP_003520174.1| PREDICTED: uncharacterized protein LOC100809655 [Glycine max]
          Length = 2881

 Score =  141 bits (356), Expect = 5e-32
 Identities = 77/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
 Frame = -2

Query: 397  KQEKNAAKTRGSGSPFKCIGLGLTQQINSEKNXXXXXXXXXXXXXXXEVVSQKKEVFMLH 218
            K EKNA K+RGS SPFKCIGLGL QQ+  EK                +   +++E+F L+
Sbjct: 2513 KSEKNATKSRGSSSPFKCIGLGLAQQVKYEKVEELSAARLRIEELEAQAACRQREIFALN 2572

Query: 217  ARLAAAESMTHDVIRDLLGVKLDMTNYASLLDNQQVQKITKKAQVYS-ESPVKEQGFIQL 41
            A+LA+AESMTHDVIRDLLGVKLDMT+YASL+D++Q +KIT+K +  + ES  KE   I+L
Sbjct: 2573 AKLASAESMTHDVIRDLLGVKLDMTSYASLIDDEQAEKITEKVKFLTLESQDKE--VIKL 2630

Query: 40   KQQLNEFIEERQG 2
            K+QLNEFIEERQG
Sbjct: 2631 KKQLNEFIEERQG 2643


>ref|XP_002521833.1| ATP binding protein, putative [Ricinus communis]
            gi|223538871|gb|EEF40469.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 2970

 Score =  127 bits (319), Expect = 1e-27
 Identities = 72/132 (54%), Positives = 85/132 (64%)
 Frame = -2

Query: 397  KQEKNAAKTRGSGSPFKCIGLGLTQQINSEKNXXXXXXXXXXXXXXXEVVSQKKEVFMLH 218
            K EKNAAK+RGSGSPFKCIGLGL QQI SE++                 V ++KEVF L+
Sbjct: 2620 KLEKNAAKSRGSGSPFKCIGLGLAQQIKSERDEELSAARLRIEELESLAVCRQKEVFALN 2679

Query: 217  ARLAAAESMTHDVIRDLLGVKLDMTNYASLLDNQQVQKITKKAQVYSESPVKEQGFIQLK 38
            ARLAAAESMTHDVIRDLLGVKLDMTNY                       V++Q  ++L+
Sbjct: 2680 ARLAAAESMTHDVIRDLLGVKLDMTNY-----------------------VEQQEVVKLR 2716

Query: 37   QQLNEFIEERQG 2
            +QLNEFIEER+G
Sbjct: 2717 KQLNEFIEERRG 2728


>ref|XP_003579214.1| PREDICTED: uncharacterized protein LOC100844828, partial
            [Brachypodium distachyon]
          Length = 2752

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/131 (48%), Positives = 88/131 (67%)
 Frame = -2

Query: 397  KQEKNAAKTRGSGSPFKCIGLGLTQQINSEKNXXXXXXXXXXXXXXXEVVSQKKEVFMLH 218
            + EK + K RGSGSPFKCIGLG  QQ+NSEK+                  S+++E+FML+
Sbjct: 2389 RPEKISLKPRGSGSPFKCIGLGFVQQVNSEKDEELSAAKQRIVELEGIAASRQREIFMLN 2448

Query: 217  ARLAAAESMTHDVIRDLLGVKLDMTNYASLLDNQQVQKITKKAQVYSESPVKEQGFIQLK 38
            A+LAA +SMTHDVIRD+LGVK++MT +A+L+D QQ     + A   +E   +    I+LK
Sbjct: 2449 AKLAATDSMTHDVIRDMLGVKMNMTTWATLVDKQQKMSTKETAICQTEESKESNELIKLK 2508

Query: 37   QQLNEFIEERQ 5
            ++L+EFIEERQ
Sbjct: 2509 KRLDEFIEERQ 2519


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