BLASTX nr result
ID: Coptis24_contig00038135
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038135 (243 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26 emb|CBI33142.3| unnamed protein product [Vitis vinifera] 124 1e-26 emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] 124 1e-26 ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containi... 113 1e-23 ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [S... 111 5e-23 >ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Vitis vinifera] Length = 590 Score = 124 bits (310), Expect = 1e-26 Identities = 57/79 (72%), Positives = 69/79 (87%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 ISYTAM+DGYA+ G +E+AR+LF+ MP KN VSWTVMISGYVENGKFDEA+ LF MP+K Sbjct: 172 ISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDK 231 Query: 61 NVVAITAMITGFCKEGNME 5 N+VA+TAMITG+CKEG + Sbjct: 232 NIVAMTAMITGYCKEGKTD 250 Score = 77.8 bits (190), Expect = 8e-13 Identities = 34/79 (43%), Positives = 55/79 (69%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+T M+ GY + G + A +LF++MP+KN V+ T MI+GY + GK D+AK LF +P + Sbjct: 203 VSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCR 262 Query: 61 NVVAITAMITGFCKEGNME 5 ++ + AMITG+ + G+ E Sbjct: 263 DLASWNAMITGYAQNGSGE 281 Score = 77.0 bits (188), Expect = 1e-12 Identities = 33/78 (42%), Positives = 52/78 (66%) Frame = -3 Query: 238 SYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEKN 59 S+ AM+ G + VE A LF+ MP +N +S+T M+ GY + G+ ++A+ALF MP+KN Sbjct: 142 SWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKN 201 Query: 58 VVAITAMITGFCKEGNME 5 VV+ T MI+G+ + G + Sbjct: 202 VVSWTVMISGYVENGKFD 219 Score = 75.1 bits (183), Expect = 6e-12 Identities = 33/78 (42%), Positives = 53/78 (67%) Frame = -3 Query: 238 SYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEKN 59 ++ + A+ G++ AR LFD MP+++ VSW +I+GY +NG FDE+K LFG+MP KN Sbjct: 49 AFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKN 108 Query: 58 VVAITAMITGFCKEGNME 5 VV+ +MI G ++ ++ Sbjct: 109 VVSWNSMIAGCIEDERID 126 Score = 67.4 bits (163), Expect = 1e-09 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ +M+ G + ++ A F MP +N SW MISG V + +EA LF MP + Sbjct: 110 VSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRR 169 Query: 61 NVVAITAMITGFCKEGNME 5 NV++ TAM+ G+ K G +E Sbjct: 170 NVISYTAMVDGYAKIGEIE 188 Score = 64.3 bits (155), Expect = 1e-08 Identities = 29/79 (36%), Positives = 48/79 (60%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ +++ GY + G + ++ LF MP KN VSW MI+G +E+ + DEA F MP++ Sbjct: 79 VSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR 138 Query: 61 NVVAITAMITGFCKEGNME 5 N + AMI+G + +E Sbjct: 139 NTASWNAMISGLVRYDRVE 157 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMM 71 ++ TAM+ GY ++G ++A+ LFD++P ++ SW MI+GY +NG +EA L M Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 290 >emb|CBI33142.3| unnamed protein product [Vitis vinifera] Length = 1198 Score = 124 bits (310), Expect = 1e-26 Identities = 57/79 (72%), Positives = 69/79 (87%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 ISYTAM+DGYA+ G +E+AR+LF+ MP KN VSWTVMISGYVENGKFDEA+ LF MP+K Sbjct: 100 ISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDK 159 Query: 61 NVVAITAMITGFCKEGNME 5 N+VA+TAMITG+CKEG + Sbjct: 160 NIVAMTAMITGYCKEGKTD 178 Score = 77.8 bits (190), Expect = 8e-13 Identities = 34/79 (43%), Positives = 55/79 (69%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+T M+ GY + G + A +LF++MP+KN V+ T MI+GY + GK D+AK LF +P + Sbjct: 131 VSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCR 190 Query: 61 NVVAITAMITGFCKEGNME 5 ++ + AMITG+ + G+ E Sbjct: 191 DLASWNAMITGYAQNGSGE 209 Score = 77.0 bits (188), Expect = 1e-12 Identities = 33/78 (42%), Positives = 52/78 (66%) Frame = -3 Query: 238 SYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEKN 59 S+ AM+ G + VE A LF+ MP +N +S+T M+ GY + G+ ++A+ALF MP+KN Sbjct: 70 SWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKN 129 Query: 58 VVAITAMITGFCKEGNME 5 VV+ T MI+G+ + G + Sbjct: 130 VVSWTVMISGYVENGKFD 147 Score = 67.4 bits (163), Expect = 1e-09 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ +M+ G + ++ A F MP +N SW MISG V + +EA LF MP + Sbjct: 38 VSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRR 97 Query: 61 NVVAITAMITGFCKEGNME 5 NV++ TAM+ G+ K G +E Sbjct: 98 NVISYTAMVDGYAKIGEIE 116 Score = 64.3 bits (155), Expect = 1e-08 Identities = 29/79 (36%), Positives = 48/79 (60%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ +++ GY + G + ++ LF MP KN VSW MI+G +E+ + DEA F MP++ Sbjct: 7 VSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR 66 Query: 61 NVVAITAMITGFCKEGNME 5 N + AMI+G + +E Sbjct: 67 NTASWNAMISGLVRYDRVE 85 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/54 (48%), Positives = 40/54 (74%) Frame = -3 Query: 166 MPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEKNVVAITAMITGFCKEGNME 5 MP+++ VSW +I+GY +NG FDE+K LFG+MP KNVV+ +MI G ++ ++ Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERID 54 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMM 71 ++ TAM+ GY ++G ++A+ LFD++P ++ SW MI+GY +NG +EA L M Sbjct: 162 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 218 >emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] Length = 1301 Score = 124 bits (310), Expect = 1e-26 Identities = 57/79 (72%), Positives = 69/79 (87%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 ISYTAM+DGYA+ G +E+AR+LF+ MP KN VSWTVMISGYVENGKFDEA+ LF MP+K Sbjct: 172 ISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDK 231 Query: 61 NVVAITAMITGFCKEGNME 5 N+VA+TAMITG+CKEG + Sbjct: 232 NIVAMTAMITGYCKEGKTD 250 Score = 77.8 bits (190), Expect = 8e-13 Identities = 34/79 (43%), Positives = 55/79 (69%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+T M+ GY + G + A +LF++MP+KN V+ T MI+GY + GK D+AK LF +P + Sbjct: 203 VSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCR 262 Query: 61 NVVAITAMITGFCKEGNME 5 ++ + AMITG+ + G+ E Sbjct: 263 DLASWNAMITGYAQNGSGE 281 Score = 77.0 bits (188), Expect = 1e-12 Identities = 33/78 (42%), Positives = 52/78 (66%) Frame = -3 Query: 238 SYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEKN 59 S+ AM+ G + VE A LF+ MP +N +S+T M+ GY + G+ ++A+ALF MP+KN Sbjct: 142 SWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKN 201 Query: 58 VVAITAMITGFCKEGNME 5 VV+ T MI+G+ + G + Sbjct: 202 VVSWTVMISGYVENGKFD 219 Score = 73.9 bits (180), Expect = 1e-11 Identities = 32/78 (41%), Positives = 53/78 (67%) Frame = -3 Query: 238 SYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEKN 59 ++ + A+ G++ AR +FD MP+++ VSW +I+GY +NG FDE+K LFG+MP KN Sbjct: 49 AFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKN 108 Query: 58 VVAITAMITGFCKEGNME 5 VV+ +MI G ++ ++ Sbjct: 109 VVSWNSMIAGCIEDERID 126 Score = 67.4 bits (163), Expect = 1e-09 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ +M+ G + ++ A F MP +N SW MISG V + +EA LF MP + Sbjct: 110 VSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRR 169 Query: 61 NVVAITAMITGFCKEGNME 5 NV++ TAM+ G+ K G +E Sbjct: 170 NVISYTAMVDGYAKIGEIE 188 Score = 64.3 bits (155), Expect = 1e-08 Identities = 29/79 (36%), Positives = 48/79 (60%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ +++ GY + G + ++ LF MP KN VSW MI+G +E+ + DEA F MP++ Sbjct: 79 VSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR 138 Query: 61 NVVAITAMITGFCKEGNME 5 N + AMI+G + +E Sbjct: 139 NTASWNAMISGLVRYDRVE 157 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMM 71 ++ TAM+ GY ++G ++A+ LFD++P ++ SW MI+GY +NG +EA L M Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 290 >ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Brachypodium distachyon] Length = 553 Score = 113 bits (283), Expect = 1e-23 Identities = 51/80 (63%), Positives = 64/80 (80%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +SYT M+DG A++G V RAR +FD MP +N VSW MI+GYVEN FDEA+ LF MP+K Sbjct: 133 VSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDK 192 Query: 61 NVVAITAMITGFCKEGNMES 2 NVVA TAMITG+CK+G++ES Sbjct: 193 NVVACTAMITGYCKDGDVES 212 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/79 (41%), Positives = 52/79 (65%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ AM+ GY + + AR LF+ MP+KN V+ T MI+GY ++G + A+ LF +P K Sbjct: 164 VSWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVK 223 Query: 61 NVVAITAMITGFCKEGNME 5 +V++ AMITG+ G+ E Sbjct: 224 DVISWNAMITGYVHNGHGE 242 Score = 68.6 bits (166), Expect = 5e-10 Identities = 30/78 (38%), Positives = 48/78 (61%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 IS+ +++ G G ++ A + F R P +N SW M++G V G+ D+A ALFG MP++ Sbjct: 71 ISWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQR 130 Query: 61 NVVAITAMITGFCKEGNM 8 NVV+ T M+ G + G + Sbjct: 131 NVVSYTTMVDGLARRGEV 148 Score = 59.7 bits (143), Expect = 2e-07 Identities = 29/62 (46%), Positives = 40/62 (64%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 ++ TAM+ GY + G VE AR LFD +P K+ +SW MI+GYV NG +EA L +M + Sbjct: 195 VACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFRE 254 Query: 61 NV 56 V Sbjct: 255 GV 256 Score = 58.5 bits (140), Expect = 5e-07 Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%) Frame = -3 Query: 241 ISYTAMMDGYAQKGH-VERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPE 65 +S+ A++ + G + AR LFD MP++N +SW +++G + +G D A A F P Sbjct: 39 VSWNALLTALWRAGRDLPAARRLFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPR 98 Query: 64 KNVVAITAMITGFCKEGNME 5 +NV + AM+ G + G M+ Sbjct: 99 RNVASWNAMLAGLVRLGRMD 118 >ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor] gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor] Length = 567 Score = 111 bits (278), Expect = 5e-23 Identities = 52/80 (65%), Positives = 63/80 (78%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +SYT M+DG A++G V RAR +FD MP++N VSW MISGYVENG F EA LF MPEK Sbjct: 143 VSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLFEAMPEK 202 Query: 61 NVVAITAMITGFCKEGNMES 2 NVVA TAMIT +CK+G++ES Sbjct: 203 NVVACTAMITSYCKQGDVES 222 Score = 61.6 bits (148), Expect = 6e-08 Identities = 29/79 (36%), Positives = 45/79 (56%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ AM+ GY + G A LF+ MP KN V+ T MI+ Y + G + A+ LF + K Sbjct: 174 VSWAAMISGYVENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAK 233 Query: 61 NVVAITAMITGFCKEGNME 5 +V++ MI G+ G+ E Sbjct: 234 DVISWNTMIAGYVHNGHGE 252 Score = 60.8 bits (146), Expect = 1e-07 Identities = 25/78 (32%), Positives = 46/78 (58%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 +S+ +++ G G ++ A + F P +N +W M++G + G+ D+A LFG MP++ Sbjct: 81 VSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADDADRLFGEMPKR 140 Query: 61 NVVAITAMITGFCKEGNM 8 NVV+ T M+ G + G + Sbjct: 141 NVVSYTTMVDGLARRGEV 158 Score = 56.6 bits (135), Expect = 2e-06 Identities = 27/62 (43%), Positives = 39/62 (62%) Frame = -3 Query: 241 ISYTAMMDGYAQKGHVERARSLFDRMPNKNAVSWTVMISGYVENGKFDEAKALFGMMPEK 62 ++ TAM+ Y ++G VE AR LFD + K+ +SW MI+GYV NG +EA L +M + Sbjct: 205 VACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFRE 264 Query: 61 NV 56 V Sbjct: 265 GV 266