BLASTX nr result

ID: Coptis24_contig00038125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038125
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38690.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002266775.1| PREDICTED: transcription factor MYC2-like [V...   108   3e-22
ref|XP_002529965.1| DNA binding protein, putative [Ricinus commu...   104   8e-21
ref|XP_002301432.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
gb|ABK94979.1| unknown [Populus trichocarpa]                          101   7e-20

>emb|CBI38690.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/79 (62%), Positives = 58/79 (73%)
 Frame = +2

Query: 41  DWSMEGDVTDIEWFYTMSLTRSFAVGDDIPASAYGSSNYVWLTGLQELQQYNSERTKEAQ 220
           D  M+GDVTD+EWFY MSLTR F+ GD +P  A  S + VWLTG QEL  YN ER KEAQ
Sbjct: 77  DGLMDGDVTDVEWFYVMSLTRCFSAGDGVPGKALSSGSLVWLTGAQELMFYNCERAKEAQ 136

Query: 221 MHGIQTLVCIPTLSGTIEI 277
           +HGI T VCIPT +G +E+
Sbjct: 137 IHGIDTFVCIPTGNGVLEL 155


>ref|XP_002266775.1| PREDICTED: transcription factor MYC2-like [Vitis vinifera]
          Length = 497

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/79 (62%), Positives = 58/79 (73%)
 Frame = +2

Query: 41  DWSMEGDVTDIEWFYTMSLTRSFAVGDDIPASAYGSSNYVWLTGLQELQQYNSERTKEAQ 220
           D  M+GDVTD+EWFY MSLTR F+ GD +P  A  S + VWLTG QEL  YN ER KEAQ
Sbjct: 118 DGLMDGDVTDVEWFYVMSLTRCFSAGDGVPGKALSSGSLVWLTGAQELMFYNCERAKEAQ 177

Query: 221 MHGIQTLVCIPTLSGTIEI 277
           +HGI T VCIPT +G +E+
Sbjct: 178 IHGIDTFVCIPTGNGVLEL 196


>ref|XP_002529965.1| DNA binding protein, putative [Ricinus communis]
           gi|223530527|gb|EEF32408.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 486

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = +2

Query: 50  MEG-DVTDIEWFYTMSLTRSFAVGDDIPASAYGSSNYVWLTGLQELQQYNSERTKEAQMH 226
           M+G + TD EWFY MSLTRSF+ GD +P  A  + + VWLTG Q+LQ YN ER KEAQMH
Sbjct: 118 MDGSNATDAEWFYVMSLTRSFSAGDGVPGKALSTGSLVWLTGRQDLQFYNCERAKEAQMH 177

Query: 227 GIQTLVCIPTLSGTIEI 277
           GI+TLVCIPT  G +E+
Sbjct: 178 GIETLVCIPTCDGVLEL 194


>ref|XP_002301432.1| predicted protein [Populus trichocarpa] gi|222843158|gb|EEE80705.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +2

Query: 50  MEG-DVTDIEWFYTMSLTRSFAVGDDIPASAYGSSNYVWLTGLQELQQYNSERTKEAQMH 226
           M+G D TD EWFY MSLTRSF+ GD I   AY + + +WLTG  ELQ YN ER KEAQMH
Sbjct: 113 MDGNDATDSEWFYVMSLTRSFSPGDGILGKAYTTGSLIWLTGGHELQFYNCERVKEAQMH 172

Query: 227 GIQTLVCIPTLSGTIEI 277
           GI+TLVCIPT  G +E+
Sbjct: 173 GIETLVCIPTSCGVLEL 189


>gb|ABK94979.1| unknown [Populus trichocarpa]
          Length = 491

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +2

Query: 50  MEG-DVTDIEWFYTMSLTRSFAVGDDIPASAYGSSNYVWLTGLQELQQYNSERTKEAQMH 226
           M+G D TD EWFY MSLTRSF+ GD I   AY + + +WLTG  ELQ YN ER KEAQMH
Sbjct: 113 MDGNDATDSEWFYVMSLTRSFSPGDGILGKAYTTGSLIWLTGGHELQFYNCERVKEAQMH 172

Query: 227 GIQTLVCIPTLSGTIEI 277
           GI+TLVCIPT  G +E+
Sbjct: 173 GIETLVCIPTSCGVLEL 189


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