BLASTX nr result
ID: Coptis24_contig00038108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038108 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera] 59 4e-07 emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera] 59 4e-07 emb|CAN66267.1| hypothetical protein VITISV_042704 [Vitis vinifera] 59 5e-07 ref|XP_004166347.1| PREDICTED: uncharacterized LOC101208571 [Cuc... 57 2e-06 gb|ADN34014.1| reverse transcriptase [Cucumis melo subsp. melo] 56 3e-06 >emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera] Length = 2260 Score = 58.9 bits (141), Expect = 4e-07 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 10/71 (14%) Frame = -3 Query: 185 KGTRSCTTHSELQPQVPPTSMPSTH----------EDPSIDLPIAHRKGTRSCTTHPVAN 36 KG S TH E +P P+ +P + E+ +++PIA RKG RSCT HP+ N Sbjct: 1667 KGALSQQTH-EAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHPIGN 1725 Query: 35 FVCYDKLTPAF 3 F+ YDKL+P F Sbjct: 1726 FISYDKLSPTF 1736 >emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera] Length = 1287 Score = 58.9 bits (141), Expect = 4e-07 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Frame = -3 Query: 248 VHPPQVSSASVHSVDRPIALRKGTRSCTTHSELQPQVPPTSMPSTH----------EDPS 99 ++P + + + S + ++ S TH E +P P+ +P + E+ Sbjct: 697 INPSPLLTCGIRSTSKRKRRKERALSQQTH-EAEPGPNPSKLPGNNAPDGTVDSELENDI 755 Query: 98 IDLPIAHRKGTRSCTTHPVANFVCYDKLTPAF 3 +++PIA RKG RSCT HP+ NF+ YDKL+P F Sbjct: 756 LNMPIAWRKGVRSCTQHPIGNFISYDKLSPTF 787 >emb|CAN66267.1| hypothetical protein VITISV_042704 [Vitis vinifera] Length = 1109 Score = 58.5 bits (140), Expect = 5e-07 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Frame = -3 Query: 263 PKATQVHPPQVSSASVHSVDRPIALRKGTRSCTTHS---ELQPQVPPTSMPSTHEDPSID 93 P+ + PQ++ + S +P+ S +T +LQP++ P+ +D Sbjct: 340 PRPNSLSSPQINLSKYSSPSQPMMTMHDKPSTSTTRGDLQLQPELRIHISPTNLNIDELD 399 Query: 92 LPIAHRKGTRSCTTHPVANFVCYDKLTPA 6 +PIA RKG R+CT HP++NFV YD L+P+ Sbjct: 400 VPIALRKGVRTCTQHPMSNFVSYDHLSPS 428 >ref|XP_004166347.1| PREDICTED: uncharacterized LOC101208571 [Cucumis sativus] Length = 2105 Score = 56.6 bits (135), Expect = 2e-06 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = -3 Query: 107 DPSIDLPIAHRKGTRSCTTHPVANFVCYDKLTPAF 3 DPS+D+PIA RK TRSCT HP+ N+V YD L+P F Sbjct: 1277 DPSLDIPIALRKDTRSCTKHPICNYVSYDNLSPQF 1311 >gb|ADN34014.1| reverse transcriptase [Cucumis melo subsp. melo] Length = 412 Score = 55.8 bits (133), Expect = 3e-06 Identities = 23/35 (65%), Positives = 29/35 (82%) Frame = -3 Query: 107 DPSIDLPIAHRKGTRSCTTHPVANFVCYDKLTPAF 3 DPS+DLPIA RKGTRSCT H ++N+V Y+ L+P F Sbjct: 130 DPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQF 164