BLASTX nr result

ID: Coptis24_contig00038108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038108
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]    59   4e-07
emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera]    59   4e-07
emb|CAN66267.1| hypothetical protein VITISV_042704 [Vitis vinifera]    59   5e-07
ref|XP_004166347.1| PREDICTED: uncharacterized LOC101208571 [Cuc...    57   2e-06
gb|ADN34014.1| reverse transcriptase [Cucumis melo subsp. melo]        56   3e-06

>emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]
          Length = 2260

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
 Frame = -3

Query: 185  KGTRSCTTHSELQPQVPPTSMPSTH----------EDPSIDLPIAHRKGTRSCTTHPVAN 36
            KG  S  TH E +P   P+ +P  +          E+  +++PIA RKG RSCT HP+ N
Sbjct: 1667 KGALSQQTH-EAEPGPNPSKLPGNNAPDGTVDSELENDILNMPIAWRKGVRSCTQHPIGN 1725

Query: 35   FVCYDKLTPAF 3
            F+ YDKL+P F
Sbjct: 1726 FISYDKLSPTF 1736


>emb|CAN73624.1| hypothetical protein VITISV_042460 [Vitis vinifera]
          Length = 1287

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
 Frame = -3

Query: 248 VHPPQVSSASVHSVDRPIALRKGTRSCTTHSELQPQVPPTSMPSTH----------EDPS 99
           ++P  + +  + S  +    ++   S  TH E +P   P+ +P  +          E+  
Sbjct: 697 INPSPLLTCGIRSTSKRKRRKERALSQQTH-EAEPGPNPSKLPGNNAPDGTVDSELENDI 755

Query: 98  IDLPIAHRKGTRSCTTHPVANFVCYDKLTPAF 3
           +++PIA RKG RSCT HP+ NF+ YDKL+P F
Sbjct: 756 LNMPIAWRKGVRSCTQHPIGNFISYDKLSPTF 787


>emb|CAN66267.1| hypothetical protein VITISV_042704 [Vitis vinifera]
          Length = 1109

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = -3

Query: 263 PKATQVHPPQVSSASVHSVDRPIALRKGTRSCTTHS---ELQPQVPPTSMPSTHEDPSID 93
           P+   +  PQ++ +   S  +P+       S +T     +LQP++     P+      +D
Sbjct: 340 PRPNSLSSPQINLSKYSSPSQPMMTMHDKPSTSTTRGDLQLQPELRIHISPTNLNIDELD 399

Query: 92  LPIAHRKGTRSCTTHPVANFVCYDKLTPA 6
           +PIA RKG R+CT HP++NFV YD L+P+
Sbjct: 400 VPIALRKGVRTCTQHPMSNFVSYDHLSPS 428


>ref|XP_004166347.1| PREDICTED: uncharacterized LOC101208571 [Cucumis sativus]
          Length = 2105

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -3

Query: 107  DPSIDLPIAHRKGTRSCTTHPVANFVCYDKLTPAF 3
            DPS+D+PIA RK TRSCT HP+ N+V YD L+P F
Sbjct: 1277 DPSLDIPIALRKDTRSCTKHPICNYVSYDNLSPQF 1311


>gb|ADN34014.1| reverse transcriptase [Cucumis melo subsp. melo]
          Length = 412

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = -3

Query: 107 DPSIDLPIAHRKGTRSCTTHPVANFVCYDKLTPAF 3
           DPS+DLPIA RKGTRSCT H ++N+V Y+ L+P F
Sbjct: 130 DPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQF 164


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