BLASTX nr result

ID: Coptis24_contig00038085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038085
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321673.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002532747.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
emb|CBI31762.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002283893.1| PREDICTED: cell division control protein 45 ...   125   5e-27
emb|CAN78533.1| hypothetical protein VITISV_006310 [Vitis vinifera]   125   5e-27

>ref|XP_002321673.1| predicted protein [Populus trichocarpa] gi|222868669|gb|EEF05800.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  129 bits (325), Expect = 2e-28
 Identities = 70/98 (71%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   YSSKVSAADVVYGVTALLES-VQSEGSCASKQFGVVXXXXXXXXXXXXXXGMQDAIMVQR 177
           YSS+VSAADVVYGVTALLES V S+GSCASKQFGV               GMQ AI VQR
Sbjct: 396 YSSRVSAADVVYGVTALLESFVSSDGSCASKQFGVAYDALSLNNLDKLKAGMQQAIKVQR 455

Query: 178 AILRQGSAAVTKRGSIRSGRRFRWVKLDDSADAKLLSY 291
           AILRQGSAA+TK GSIRSGR+FRWVKL+DS D KLL Y
Sbjct: 456 AILRQGSAAITKSGSIRSGRKFRWVKLEDSVDTKLLGY 493


>ref|XP_002532747.1| conserved hypothetical protein [Ricinus communis]
           gi|223527524|gb|EEF29649.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 595

 Score =  129 bits (324), Expect = 2e-28
 Identities = 70/98 (71%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   YSSKVSAADVVYGVTALLES-VQSEGSCASKQFGVVXXXXXXXXXXXXXXGMQDAIMVQR 177
           YSSKVSAADVVYGVTALLES V S+GSCASKQFGV               GMQ AI VQR
Sbjct: 399 YSSKVSAADVVYGVTALLESFVSSDGSCASKQFGVAYDALSLSNLDKLKAGMQQAIKVQR 458

Query: 178 AILRQGSAAVTKRGSIRSGRRFRWVKLDDSADAKLLSY 291
           +ILRQGSAA+TK GSIRSGR+FRWVKL+DS D KLL Y
Sbjct: 459 SILRQGSAAITKPGSIRSGRKFRWVKLEDSVDTKLLGY 496


>emb|CBI31762.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/98 (69%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   YSSKVSAADVVYGVTALLES-VQSEGSCASKQFGVVXXXXXXXXXXXXXXGMQDAIMVQR 177
           YSS+VSAADVVYGVTALLES V+S+GS ASKQFGV               GMQ AI +QR
Sbjct: 302 YSSRVSAADVVYGVTALLESFVKSDGSSASKQFGVAFDALSLSNLDKLRNGMQYAIRIQR 361

Query: 178 AILRQGSAAVTKRGSIRSGRRFRWVKLDDSADAKLLSY 291
           AILRQGSAA+TK G+IRSGR+FRWVKL+DSAD KLL Y
Sbjct: 362 AILRQGSAAITKSGAIRSGRKFRWVKLEDSADTKLLGY 399


>ref|XP_002283893.1| PREDICTED: cell division control protein 45 homolog [Vitis
           vinifera]
          Length = 592

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/98 (69%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   YSSKVSAADVVYGVTALLES-VQSEGSCASKQFGVVXXXXXXXXXXXXXXGMQDAIMVQR 177
           YSS+VSAADVVYGVTALLES V+S+GS ASKQFGV               GMQ AI +QR
Sbjct: 396 YSSRVSAADVVYGVTALLESFVKSDGSSASKQFGVAFDALSLSNLDKLRNGMQYAIRIQR 455

Query: 178 AILRQGSAAVTKRGSIRSGRRFRWVKLDDSADAKLLSY 291
           AILRQGSAA+TK G+IRSGR+FRWVKL+DSAD KLL Y
Sbjct: 456 AILRQGSAAITKSGAIRSGRKFRWVKLEDSADTKLLGY 493


>emb|CAN78533.1| hypothetical protein VITISV_006310 [Vitis vinifera]
          Length = 592

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/98 (69%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   YSSKVSAADVVYGVTALLES-VQSEGSCASKQFGVVXXXXXXXXXXXXXXGMQDAIMVQR 177
           YSS+VSAADVVYGVTALLES V+S+GS ASKQFGV               GMQ AI +QR
Sbjct: 396 YSSRVSAADVVYGVTALLESFVKSDGSSASKQFGVAFDALSLSNLDKLRNGMQYAIRIQR 455

Query: 178 AILRQGSAAVTKRGSIRSGRRFRWVKLDDSADAKLLSY 291
           AILRQGSAA+TK G+IRSGR+FRWVKL+DSAD KLL Y
Sbjct: 456 AILRQGSAAITKSGAIRSGRKFRWVKLEDSADTKLLGY 493


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