BLASTX nr result

ID: Coptis24_contig00038080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038080
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60473.1| hypothetical protein VITISV_028413 [Vitis vinifera]    58   6e-11
emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera]    58   6e-11
emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]    58   8e-11
emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera]    62   1e-10
emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera]    62   1e-10

>emb|CAN60473.1| hypothetical protein VITISV_028413 [Vitis vinifera]
          Length = 1659

 Score = 58.2 bits (139), Expect(2) = 6e-11
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = -1

Query: 142  RPISLVGSAYKIISKSMALRLKKVLHKVISQEQGAFIHDRQILDGIL 2
            RPISLVG  YKI++K +A RLKKV+ KV+S  Q AF+  RQILD  L
Sbjct: 1052 RPISLVGGLYKILAKVLANRLKKVVGKVVSSAQNAFVEGRQILDAXL 1098



 Score = 33.5 bits (75), Expect(2) = 6e-11
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 237  DLFDTGYLAHHLNNTFIALIPKVNDADDISD 145
            D F+ G     LN+TF+ L+PK   A+D+ D
Sbjct: 1020 DFFERGKFVRSLNSTFLVLVPKKGGAEDLRD 1050


>emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera]
          Length = 655

 Score = 58.2 bits (139), Expect(2) = 6e-11
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = -1

Query: 142 RPISLVGSAYKIISKSMALRLKKVLHKVISQEQGAFIHDRQILDGIL 2
           RPISLVG  YKI++K +A RLKKV+ KV+S  Q AF+  RQILD  L
Sbjct: 38  RPISLVGGLYKILAKVLANRLKKVVGKVVSSAQNAFVEGRQILDAAL 84



 Score = 33.5 bits (75), Expect(2) = 6e-11
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 237 DLFDTGYLAHHLNNTFIALIPKVNDADDISD 145
           D F+ G     LN+TF+ L+PK   A+D+ D
Sbjct: 6   DFFERGKFVRSLNSTFLVLVPKKGGAEDLRD 36


>emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]
          Length = 1566

 Score = 58.2 bits (139), Expect(2) = 8e-11
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = -1

Query: 142  RPISLVGSAYKIISKSMALRLKKVLHKVISQEQGAFIHDRQILDGIL 2
            RPISLVG  YKI++K +A RLKKV+ KV+S  Q AF+  RQILD  L
Sbjct: 902  RPISLVGGLYKILAKVLANRLKKVVGKVVSSAQNAFVEGRQILDAAL 948



 Score = 33.1 bits (74), Expect(2) = 8e-11
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 237 DLFDTGYLAHHLNNTFIALIPKVNDADDISD 145
           D F+ G     LN+TF+ L+PK   A+D+ D
Sbjct: 870 DFFERGKFVRSLNSTFLVLVPKKXGAEDLRD 900


>emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera]
          Length = 1742

 Score = 61.6 bits (148), Expect(2) = 1e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -1

Query: 142  RPISLVGSAYKIISKSMALRLKKVLHKVISQEQGAFIHDRQILDGIL 2
            RPISLVGS YK ++K +A RLKKV+ KVIS+ QGAF+  RQILD +L
Sbjct: 912  RPISLVGSLYKWLAKVLANRLKKVVGKVISKAQGAFVEGRQILDAVL 958



 Score = 29.3 bits (64), Expect(2) = 1e-10
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 237 DLFDTGYLAHHLNNTFIALIPKVNDADDISD 145
           + ++ G     LN TF+ LIPK   A+D+ D
Sbjct: 880 EFYENGKFVKSLNATFLVLIPKKVGAEDLGD 910


>emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera]
          Length = 1177

 Score = 61.6 bits (148), Expect(2) = 1e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -1

Query: 142 RPISLVGSAYKIISKSMALRLKKVLHKVISQEQGAFIHDRQILDGIL 2
           RPISLVGS YK ++K +A RLKKV+ KVIS+ QGAF+  RQILD +L
Sbjct: 369 RPISLVGSLYKWLAKVLANRLKKVVGKVISKAQGAFVEGRQILDAVL 415



 Score = 29.3 bits (64), Expect(2) = 1e-10
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 237 DLFDTGYLAHHLNNTFIALIPKVNDADDISD 145
           + ++ G     LN TF+ LIPK   A+D+ D
Sbjct: 337 EFYENGKFVKSLNATFLVLIPKKVGAEDLGD 367


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