BLASTX nr result
ID: Coptis24_contig00038068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00038068
(442 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 205 3e-51
emb|CBI35900.3| unnamed protein product [Vitis vinifera] 201 7e-50
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu... 193 1e-47
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 191 4e-47
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2... 184 8e-45
>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
Length = 5286
Score = 205 bits (521), Expect = 3e-51
Identities = 102/150 (68%), Positives = 121/150 (80%), Gaps = 4/150 (2%)
Frame = +3
Query: 3 NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
N+VLSIHMD+Q+DGKTLIG+YVC ERPGEFRWQPGSLTQA +NGFWVVFE IDKAPSDVQ
Sbjct: 392 NQVLSIHMDDQIDGKTLIGSYVCMERPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQ 451
Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKNTLGVLWRRVLIS 350
SILLPLLEG +S++ GEAI V++SFRLF+T+SS D+S G N+LGVLWRRV+I
Sbjct: 452 SILLPLLEGASSFLTSHGEAIRVAESFRLFSTISSSNVDISCKREGGNSLGVLWRRVMIG 511
Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
+NED I+ YP+LE VA LI T+E
Sbjct: 512 HPSNEDLQSIVKAWYPELEPVAGKLIGTFE 541
Score = 55.8 bits (133), Expect = 3e-06
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Frame = +3
Query: 18 IHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLP 197
I+ E D + +G+YV T+ G+ + G L +A+ NG+W+V ++++ APSDV L
Sbjct: 1129 INNHEHTDLQEYLGSYV-TDASGKLVFHEGVLVKAVRNGYWIVLDELNLAPSDVLEALNR 1187
Query: 198 LLEGTNS-YVAGSGEAISVSDSFRLFATMSSLTDDVSGKNTLGVLWRRVLISPSTNE--- 365
LL+ +V E I F LFAT + T G+ L +R + +E
Sbjct: 1188 LLDDNRELFVPELRETIPAHPDFMLFATQNPPT-LYGGRKMLSRAFRNRFVEIHVDEIPE 1246
Query: 366 -DFLLIINKLYPDLEAVAKNLIE 431
+ I++K E+ AK ++E
Sbjct: 1247 DELSTILDKRCKIPESYAKKMVE 1269
>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
Length = 5267
Score = 201 bits (510), Expect = 7e-50
Identities = 100/146 (68%), Positives = 118/146 (80%), Gaps = 4/146 (2%)
Frame = +3
Query: 3 NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
N+VLSIHMD+Q+DGKTLIG+YVC ERPGEFRWQPGSLTQA +NGFWVVFE IDKAPSDVQ
Sbjct: 333 NQVLSIHMDDQIDGKTLIGSYVCMERPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQ 392
Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKNTLGVLWRRVLIS 350
SILLPLLEG +S++ GEAI V++SFRLF+T+SS D+S G N+LGVLWRRV+I
Sbjct: 393 SILLPLLEGASSFLTSHGEAIRVAESFRLFSTISSSNVDISCKREGGNSLGVLWRRVMIG 452
Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLI 428
+NED I+ YP+LE VA LI
Sbjct: 453 HPSNEDLQSIVKAWYPELEPVAGKLI 478
>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
gi|223539440|gb|EEF41030.1| ATP binding protein,
putative [Ricinus communis]
Length = 5282
Score = 193 bits (491), Expect = 1e-47
Identities = 94/150 (62%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
Frame = +3
Query: 3 NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
N+VL+IHMDEQ+DGKTLIG YVC E+PGEFRWQPGSL QA+LNG+WVVFEDIDKAPSDVQ
Sbjct: 381 NQVLTIHMDEQIDGKTLIGTYVCAEQPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQ 440
Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDD----VSGKNTLGVLWRRVLIS 350
SILLPLLEG + ++ G GE I+V +SFRLF+T+S+ D G N+L +LWRRV+I
Sbjct: 441 SILLPLLEGASFFITGHGEEITVPESFRLFSTISTSKIDGFCSKEGGNSLSILWRRVMIG 500
Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
N+D I+ YP+LE +A+ LI T+E
Sbjct: 501 LPNNDDLHNIVKARYPNLEPLARKLIGTFE 530
>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
Length = 5431
Score = 191 bits (486), Expect = 4e-47
Identities = 93/150 (62%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
Frame = +3
Query: 3 NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
N+VL IHMD+Q+DGK LIG+YVC ERPGEFRWQPGSLTQA+ NG WVVFED+DKAPSDVQ
Sbjct: 416 NQVLFIHMDDQIDGKMLIGSYVCAERPGEFRWQPGSLTQAVQNGLWVVFEDVDKAPSDVQ 475
Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDD----VSGKNTLGVLWRRVLIS 350
SILLPLLEG N++ G GE I V+++FRLFAT+S+ D G T+G+LWR+V+I
Sbjct: 476 SILLPLLEGGNTFSTGRGEEIRVAENFRLFATISAFRLDQFRNKEGGGTIGMLWRKVMIG 535
Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
NED I+ YP LE++A L+ET E
Sbjct: 536 SPNNEDMQSIVKTQYPILESIASKLVETLE 565
Score = 54.3 bits (129), Expect = 1e-05
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +3
Query: 18 IHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLP 197
I+ E D + +G+Y+ T+ G +Q G L +A+ NG+W+V ++++ APSDV L
Sbjct: 1152 INNHEHTDLQEYLGSYL-TDSSGNLVFQEGMLVKAVRNGYWIVLDELNLAPSDVLEALNR 1210
Query: 198 LLEGTNS-YVAGSGEAISVSDSFRLFATMSSLT 293
LL+ +V E I F LFAT + T
Sbjct: 1211 LLDDNRELFVPELRETIQAHPDFMLFATQNPPT 1243
>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
predicted protein [Populus trichocarpa]
Length = 5317
Score = 184 bits (466), Expect = 8e-45
Identities = 90/150 (60%), Positives = 116/150 (77%), Gaps = 4/150 (2%)
Frame = +3
Query: 3 NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
N+VLSIHMD+Q+DGKTLIG+YVCTE+PGEFRWQPGSL QA+LNG+WVVFEDIDKAPSDVQ
Sbjct: 381 NQVLSIHMDDQIDGKTLIGSYVCTEQPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQ 440
Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKNTLGVLWRRVLIS 350
SILLPLLEG +++ GE I V++SF+LF+T+++ +VS G ++L LWRRV+I
Sbjct: 441 SILLPLLEGEIAFITSHGEEIRVAESFQLFSTITTSKSNVSHTAEGGSSLSTLWRRVMIG 500
Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
+N+D I+ YP + + LIET E
Sbjct: 501 LPSNDDLENIMKAWYPSMGPLTGRLIETME 530