BLASTX nr result

ID: Coptis24_contig00038068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038068
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   205   3e-51
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              201   7e-50
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   193   1e-47
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   191   4e-47
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  205 bits (521), Expect = 3e-51
 Identities = 102/150 (68%), Positives = 121/150 (80%), Gaps = 4/150 (2%)
 Frame = +3

Query: 3   NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
           N+VLSIHMD+Q+DGKTLIG+YVC ERPGEFRWQPGSLTQA +NGFWVVFE IDKAPSDVQ
Sbjct: 392 NQVLSIHMDDQIDGKTLIGSYVCMERPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQ 451

Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKNTLGVLWRRVLIS 350
           SILLPLLEG +S++   GEAI V++SFRLF+T+SS   D+S    G N+LGVLWRRV+I 
Sbjct: 452 SILLPLLEGASSFLTSHGEAIRVAESFRLFSTISSSNVDISCKREGGNSLGVLWRRVMIG 511

Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
             +NED   I+   YP+LE VA  LI T+E
Sbjct: 512 HPSNEDLQSIVKAWYPELEPVAGKLIGTFE 541



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
 Frame = +3

Query: 18   IHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLP 197
            I+  E  D +  +G+YV T+  G+  +  G L +A+ NG+W+V ++++ APSDV   L  
Sbjct: 1129 INNHEHTDLQEYLGSYV-TDASGKLVFHEGVLVKAVRNGYWIVLDELNLAPSDVLEALNR 1187

Query: 198  LLEGTNS-YVAGSGEAISVSDSFRLFATMSSLTDDVSGKNTLGVLWRRVLISPSTNE--- 365
            LL+     +V    E I     F LFAT +  T    G+  L   +R   +    +E   
Sbjct: 1188 LLDDNRELFVPELRETIPAHPDFMLFATQNPPT-LYGGRKMLSRAFRNRFVEIHVDEIPE 1246

Query: 366  -DFLLIINKLYPDLEAVAKNLIE 431
             +   I++K     E+ AK ++E
Sbjct: 1247 DELSTILDKRCKIPESYAKKMVE 1269


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/146 (68%), Positives = 118/146 (80%), Gaps = 4/146 (2%)
 Frame = +3

Query: 3   NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
           N+VLSIHMD+Q+DGKTLIG+YVC ERPGEFRWQPGSLTQA +NGFWVVFE IDKAPSDVQ
Sbjct: 333 NQVLSIHMDDQIDGKTLIGSYVCMERPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQ 392

Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKNTLGVLWRRVLIS 350
           SILLPLLEG +S++   GEAI V++SFRLF+T+SS   D+S    G N+LGVLWRRV+I 
Sbjct: 393 SILLPLLEGASSFLTSHGEAIRVAESFRLFSTISSSNVDISCKREGGNSLGVLWRRVMIG 452

Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLI 428
             +NED   I+   YP+LE VA  LI
Sbjct: 453 HPSNEDLQSIVKAWYPELEPVAGKLI 478


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
           gi|223539440|gb|EEF41030.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 5282

 Score =  193 bits (491), Expect = 1e-47
 Identities = 94/150 (62%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
 Frame = +3

Query: 3   NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
           N+VL+IHMDEQ+DGKTLIG YVC E+PGEFRWQPGSL QA+LNG+WVVFEDIDKAPSDVQ
Sbjct: 381 NQVLTIHMDEQIDGKTLIGTYVCAEQPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQ 440

Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDD----VSGKNTLGVLWRRVLIS 350
           SILLPLLEG + ++ G GE I+V +SFRLF+T+S+   D      G N+L +LWRRV+I 
Sbjct: 441 SILLPLLEGASFFITGHGEEITVPESFRLFSTISTSKIDGFCSKEGGNSLSILWRRVMIG 500

Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
              N+D   I+   YP+LE +A+ LI T+E
Sbjct: 501 LPNNDDLHNIVKARYPNLEPLARKLIGTFE 530


>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
          Length = 5431

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/150 (62%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
 Frame = +3

Query: 3   NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
           N+VL IHMD+Q+DGK LIG+YVC ERPGEFRWQPGSLTQA+ NG WVVFED+DKAPSDVQ
Sbjct: 416 NQVLFIHMDDQIDGKMLIGSYVCAERPGEFRWQPGSLTQAVQNGLWVVFEDVDKAPSDVQ 475

Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDD----VSGKNTLGVLWRRVLIS 350
           SILLPLLEG N++  G GE I V+++FRLFAT+S+   D      G  T+G+LWR+V+I 
Sbjct: 476 SILLPLLEGGNTFSTGRGEEIRVAENFRLFATISAFRLDQFRNKEGGGTIGMLWRKVMIG 535

Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
              NED   I+   YP LE++A  L+ET E
Sbjct: 536 SPNNEDMQSIVKTQYPILESIASKLVETLE 565



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +3

Query: 18   IHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLP 197
            I+  E  D +  +G+Y+ T+  G   +Q G L +A+ NG+W+V ++++ APSDV   L  
Sbjct: 1152 INNHEHTDLQEYLGSYL-TDSSGNLVFQEGMLVKAVRNGYWIVLDELNLAPSDVLEALNR 1210

Query: 198  LLEGTNS-YVAGSGEAISVSDSFRLFATMSSLT 293
            LL+     +V    E I     F LFAT +  T
Sbjct: 1211 LLDDNRELFVPELRETIQAHPDFMLFATQNPPT 1243


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
           predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/150 (60%), Positives = 116/150 (77%), Gaps = 4/150 (2%)
 Frame = +3

Query: 3   NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 182
           N+VLSIHMD+Q+DGKTLIG+YVCTE+PGEFRWQPGSL QA+LNG+WVVFEDIDKAPSDVQ
Sbjct: 381 NQVLSIHMDDQIDGKTLIGSYVCTEQPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQ 440

Query: 183 SILLPLLEGTNSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKNTLGVLWRRVLIS 350
           SILLPLLEG  +++   GE I V++SF+LF+T+++   +VS    G ++L  LWRRV+I 
Sbjct: 441 SILLPLLEGEIAFITSHGEEIRVAESFQLFSTITTSKSNVSHTAEGGSSLSTLWRRVMIG 500

Query: 351 PSTNEDFLLIINKLYPDLEAVAKNLIETYE 440
             +N+D   I+   YP +  +   LIET E
Sbjct: 501 LPSNDDLENIMKAWYPSMGPLTGRLIETME 530


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