BLASTX nr result

ID: Coptis24_contig00038002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038002
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB86676.1| putative protein [Arabidopsis thaliana]                54   1e-05

>emb|CAB86676.1| putative protein [Arabidopsis thaliana]
          Length = 534

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = -1

Query: 370 YPNKIPSLSFISWLALRDGLKTLQRLKQWNFIASDVCVLCNRGVETEEHLF 218
           +PN  P  SFI+W+A R+ L T ++L +WN  A+  C  C+  +ET EH+F
Sbjct: 110 FPNSTPKYSFITWIAFRNRLATGEKLVKWNNDANGGCSFCDEAMETREHIF 160


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