BLASTX nr result
ID: Coptis24_contig00037907
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037907 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38018.3| unnamed protein product [Vitis vinifera] 192 2e-47 ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ... 192 2e-47 ref|XP_004148531.1| PREDICTED: DNA replication licensing factor ... 185 3e-45 ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Med... 185 3e-45 ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|2... 185 3e-45 >emb|CBI38018.3| unnamed protein product [Vitis vinifera] Length = 834 Score = 192 bits (488), Expect = 2e-47 Identities = 90/111 (81%), Positives = 103/111 (92%) Frame = -1 Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167 +H + E+EGESLDVDA DV+DYD DLYTKMVRYPLEVLAIFD+VL+DM +R+NP+FEKHI Sbjct: 158 IHRVLEIEGESLDVDAHDVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHI 217 Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVC 14 Q R FNL++S SMRNLNPSDIEKMVS+KGMIIRCSSIIPEIREAVF+CLVC Sbjct: 218 QARIFNLKTSTSMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAVFRCLVC 268 >ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera] Length = 840 Score = 192 bits (488), Expect = 2e-47 Identities = 90/111 (81%), Positives = 103/111 (92%) Frame = -1 Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167 +H + E+EGESLDVDA DV+DYD DLYTKMVRYPLEVLAIFD+VL+DM +R+NP+FEKHI Sbjct: 158 IHRVLEIEGESLDVDAHDVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHI 217 Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVC 14 Q R FNL++S SMRNLNPSDIEKMVS+KGMIIRCSSIIPEIREAVF+CLVC Sbjct: 218 QARIFNLKTSTSMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAVFRCLVC 268 >ref|XP_004148531.1| PREDICTED: DNA replication licensing factor mcm4-like [Cucumis sativus] gi|449483538|ref|XP_004156619.1| PREDICTED: DNA replication licensing factor mcm4-like [Cucumis sativus] Length = 844 Score = 185 bits (470), Expect = 3e-45 Identities = 86/113 (76%), Positives = 103/113 (91%) Frame = -1 Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167 + + E EG+SLDVDAQD+++YD DLYTKMVRYPLEVLAIFD+VL++M ++NP+FEKHI Sbjct: 164 IKRVLENEGDSLDVDAQDLFNYDADLYTKMVRYPLEVLAIFDIVLMEMVPQINPLFEKHI 223 Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVCGY 8 Q R FNLR+S SMRNLNPSDIE+MVS+KGMIIRCSSIIPEIREA+F+CLVCGY Sbjct: 224 QTRIFNLRTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 276 >ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Medicago truncatula] gi|355508057|gb|AES89199.1| DNA replication licensing factor mcm4-B [Medicago truncatula] Length = 868 Score = 185 bits (470), Expect = 3e-45 Identities = 85/113 (75%), Positives = 104/113 (92%) Frame = -1 Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167 + + E+EGES+DVDA+DV+D+D +LY+KMVRYPLEVLAIFD+VL++M RMNPMFEKH+ Sbjct: 159 IKQVIELEGESIDVDARDVFDHDHELYSKMVRYPLEVLAIFDMVLMNMVTRMNPMFEKHV 218 Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVCGY 8 Q R FNL+SS SMRNLNPSDIE+MVS+KGMIIRCSSIIPEIREA+F+CLVCG+ Sbjct: 219 QTRIFNLKSSTSMRNLNPSDIERMVSMKGMIIRCSSIIPEIREAIFRCLVCGF 271 >ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|222849431|gb|EEE86978.1| predicted protein [Populus trichocarpa] Length = 720 Score = 185 bits (470), Expect = 3e-45 Identities = 86/114 (75%), Positives = 104/114 (91%) Frame = -1 Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167 +H + E+EGE LDVDA DV++YD++LY KMVRYPLEVLAIFD+VL+D+ + + P+FEKH+ Sbjct: 66 IHGVLEMEGEWLDVDAHDVFNYDVELYGKMVRYPLEVLAIFDIVLMDIVSLIQPLFEKHV 125 Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVCGYL 5 QVR FNL+SS +MRNLNPSDIEKMVS+KGMIIRCSSIIPEIREAVFKC+VCGYL Sbjct: 126 QVRIFNLKSSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAVFKCIVCGYL 179