BLASTX nr result

ID: Coptis24_contig00037907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037907
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38018.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   192   2e-47
ref|XP_004148531.1| PREDICTED: DNA replication licensing factor ...   185   3e-45
ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Med...   185   3e-45
ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45

>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  192 bits (488), Expect = 2e-47
 Identities = 90/111 (81%), Positives = 103/111 (92%)
 Frame = -1

Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167
           +H + E+EGESLDVDA DV+DYD DLYTKMVRYPLEVLAIFD+VL+DM +R+NP+FEKHI
Sbjct: 158 IHRVLEIEGESLDVDAHDVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHI 217

Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVC 14
           Q R FNL++S SMRNLNPSDIEKMVS+KGMIIRCSSIIPEIREAVF+CLVC
Sbjct: 218 QARIFNLKTSTSMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAVFRCLVC 268


>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  192 bits (488), Expect = 2e-47
 Identities = 90/111 (81%), Positives = 103/111 (92%)
 Frame = -1

Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167
           +H + E+EGESLDVDA DV+DYD DLYTKMVRYPLEVLAIFD+VL+DM +R+NP+FEKHI
Sbjct: 158 IHRVLEIEGESLDVDAHDVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHI 217

Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVC 14
           Q R FNL++S SMRNLNPSDIEKMVS+KGMIIRCSSIIPEIREAVF+CLVC
Sbjct: 218 QARIFNLKTSTSMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAVFRCLVC 268


>ref|XP_004148531.1| PREDICTED: DNA replication licensing factor mcm4-like [Cucumis
           sativus] gi|449483538|ref|XP_004156619.1| PREDICTED: DNA
           replication licensing factor mcm4-like [Cucumis sativus]
          Length = 844

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/113 (76%), Positives = 103/113 (91%)
 Frame = -1

Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167
           +  + E EG+SLDVDAQD+++YD DLYTKMVRYPLEVLAIFD+VL++M  ++NP+FEKHI
Sbjct: 164 IKRVLENEGDSLDVDAQDLFNYDADLYTKMVRYPLEVLAIFDIVLMEMVPQINPLFEKHI 223

Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVCGY 8
           Q R FNLR+S SMRNLNPSDIE+MVS+KGMIIRCSSIIPEIREA+F+CLVCGY
Sbjct: 224 QTRIFNLRTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 276


>ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Medicago truncatula]
           gi|355508057|gb|AES89199.1| DNA replication licensing
           factor mcm4-B [Medicago truncatula]
          Length = 868

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/113 (75%), Positives = 104/113 (92%)
 Frame = -1

Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167
           +  + E+EGES+DVDA+DV+D+D +LY+KMVRYPLEVLAIFD+VL++M  RMNPMFEKH+
Sbjct: 159 IKQVIELEGESIDVDARDVFDHDHELYSKMVRYPLEVLAIFDMVLMNMVTRMNPMFEKHV 218

Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVCGY 8
           Q R FNL+SS SMRNLNPSDIE+MVS+KGMIIRCSSIIPEIREA+F+CLVCG+
Sbjct: 219 QTRIFNLKSSTSMRNLNPSDIERMVSMKGMIIRCSSIIPEIREAIFRCLVCGF 271


>ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|222849431|gb|EEE86978.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/114 (75%), Positives = 104/114 (91%)
 Frame = -1

Query: 346 LHHIFEVEGESLDVDAQDVYDYDIDLYTKMVRYPLEVLAIFDLVLLDMAARMNPMFEKHI 167
           +H + E+EGE LDVDA DV++YD++LY KMVRYPLEVLAIFD+VL+D+ + + P+FEKH+
Sbjct: 66  IHGVLEMEGEWLDVDAHDVFNYDVELYGKMVRYPLEVLAIFDIVLMDIVSLIQPLFEKHV 125

Query: 166 QVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIRCSSIIPEIREAVFKCLVCGYL 5
           QVR FNL+SS +MRNLNPSDIEKMVS+KGMIIRCSSIIPEIREAVFKC+VCGYL
Sbjct: 126 QVRIFNLKSSTTMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAVFKCIVCGYL 179


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