BLASTX nr result

ID: Coptis24_contig00037904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037904
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266017.1| PREDICTED: probable WRKY transcription facto...    93   2e-17
emb|CBI19998.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002527935.1| WRKY transcription factor, putative [Ricinus...    85   5e-15
ref|XP_002298189.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
gb|ACU21043.1| unknown [Glycine max]                                   68   7e-10

>ref|XP_002266017.1| PREDICTED: probable WRKY transcription factor 9-like [Vitis
           vinifera]
          Length = 476

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 59/136 (43%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
 Frame = +2

Query: 5   NDSSKGVVLDLTNNRYNSPQQQYTPPTSSHSHLQINYPWASNNSAGYQNGVSNSHKGDVD 184
           ND SKG+VLDLTN   + PQQ +   +SSHS  Q+ + W  +  + +  G +N       
Sbjct: 334 NDPSKGIVLDLTNTTPSDPQQ-FPLQSSSHSSAQLGFSWMPSKPSYHSGGSTNIANNLFP 392

Query: 185 N-----------ENVSAIASDPKFRVAVAAAITSFITKENQTV-----PPTNSSLRNMEN 316
           N           ENV+AI S+P FRVAVAAAITSFI KE+ T      PP  +       
Sbjct: 393 NPRAAEEDRSIAENVTAITSNPDFRVAVAAAITSFINKESHTSTHTTGPPFANPRDGEGG 452

Query: 317 ASSSSNKWVLESFPAS 364
             SS N WVLES PAS
Sbjct: 453 GGSSGNNWVLESLPAS 468


>emb|CBI19998.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 58/136 (42%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
 Frame = +2

Query: 5   NDSSKGVVLDLTNNRYNSPQQQYTPPTSSHSHLQINYPWASNNSAGYQNGVSNSHKGDVD 184
           ND SKG+VLDLTN   + PQQ +   +SSHS  Q+ + W  +  + +  G +N       
Sbjct: 345 NDPSKGIVLDLTNTTPSDPQQ-FPLQSSSHSSAQLGFSWMPSKPSYHSGGSTNIANNLFP 403

Query: 185 N-----------ENVSAIASDPKFRVAVAAAITSFITKENQTV-----PPTNSSLRNMEN 316
           N           ENV+AI S+P FRVAVAAAITSFI KE+ T      PP  +       
Sbjct: 404 NPRAAEEDRSIAENVTAITSNPDFRVAVAAAITSFINKESHTSTHTTGPPFANPRDGEGG 463

Query: 317 ASSSSNKWVLESFPAS 364
             SS N WVLES PA+
Sbjct: 464 GGSSGNNWVLESLPAN 479


>ref|XP_002527935.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223532639|gb|EEF34424.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 532

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 61/138 (44%), Positives = 77/138 (55%), Gaps = 18/138 (13%)
 Frame = +2

Query: 5   NDSSKGVVLDLTNNRYNSPQQQYTPP----TSSHSHLQINYPWASN-NSAGYQNGVSNSH 169
           ND SKG+VLDLTNN Y++      PP     SS S  +  + W     S+ +QN  +++H
Sbjct: 390 NDPSKGIVLDLTNN-YSTHHDHQPPPQFPLASSSSSARPAFSWLQGMKSSTHQNNGNSTH 448

Query: 170 ---------KGDVDNENVSAIASDPKFRVAVAAAITSFITKENQTVPPTNSSLRNME--- 313
                       +  ENV+AIASDPKFRVAVAAAITS I KE    PP  S + N E   
Sbjct: 449 FTSARVVEGTKSLLAENVTAIASDPKFRVAVAAAITSLINKEKGGAPP--SLVANKEAGE 506

Query: 314 -NASSSSNKWVLESFPAS 364
             +SSSS  WVL+S  A+
Sbjct: 507 GGSSSSSKNWVLDSLSAN 524


>ref|XP_002298189.1| predicted protein [Populus trichocarpa] gi|222845447|gb|EEE82994.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 20/128 (15%)
 Frame = +2

Query: 5   NDSSKGVVLDLTNNRYNSPQQ--------QYTPPTSSHSHLQINYP-WASNNSAGYQNGV 157
           ND SKG+VLDLT++R  S  Q        QY+  ++SH+    ++  W  + S+ YQN  
Sbjct: 376 NDPSKGIVLDLTHDRDRSLLQYPMMASSSQYSSSSASHNQYPSSFSNWMQSRSSSYQNSA 435

Query: 158 SNSHKGDVDN-----------ENVSAIASDPKFRVAVAAAITSFITKENQTVPPTNSSLR 304
           +N H  +              ENV+AIASDPKFRVAVAAAITS I KEN +  P   SL 
Sbjct: 436 ANVHGSNFAGHRVQEEKLLMAENVTAIASDPKFRVAVAAAITSLINKENSSSHPIEPSLI 495

Query: 305 NMENASSS 328
           + +    S
Sbjct: 496 SRDGERGS 503


>gb|ACU21043.1| unknown [Glycine max]
          Length = 246

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 24/129 (18%)
 Frame = +2

Query: 8   DSSKGVVLDLTNNRYNSPQQQYTPPTSSHSHLQINYPWASNNSAG--------------- 142
           D SKG+VLDLT+N  N P  +++  +SS++     + W  N   G               
Sbjct: 120 DPSKGIVLDLTSN-LNEPPLRFSSGSSSNTATDPRFSWMQNKYQGGGAIAMNNTFHKPRA 178

Query: 143 -------YQNGVSNSHKGDVDNENVSAIASDPKFRVAVAAAITSFITKENQTVPPTNSSL 301
                  ++   SN++K  +D++NVS+IASDPKFRV VA AITS + KE+    P  +S 
Sbjct: 179 LDIHDRIWKGEESNNNK-PLDHDNVSSIASDPKFRVVVAEAITSLMNKESHATHPIGTSF 237

Query: 302 --RNMENAS 322
             R+ +N S
Sbjct: 238 GPRSGQNGS 246


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