BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037900
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containi...   200   9e-50
emb|CBI32034.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi...   198   4e-49
ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago ...   193   1e-47

>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  201 bits (511), Expect = 5e-50
 Identities = 98/134 (73%), Positives = 112/134 (83%)
 Frame = +1

Query: 4   SSGVYVLLSRVYASANRWNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPC 183
           SSGVYVLLSRVYASA+RWNDVGLVR+LM+  GI KEPGCSLIEVDG  H+F AGDTSHP 
Sbjct: 436 SSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQ 495

Query: 184 SKEIYRSLRDIEDRLESAGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQG 363
           +KEIY+ L  +E+R++S GY PD SQAPMVDE    K+ SL LHSERLAI+ GLLN + G
Sbjct: 496 TKEIYQVLNVVEERIDSTGYKPDYSQAPMVDELNTSKRDSLRLHSERLAIALGLLNLKPG 555

Query: 364 MPIRIFKNLRVCND 405
           MPIRIFKNLRVC+D
Sbjct: 556 MPIRIFKNLRVCDD 569


>ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  200 bits (509), Expect = 9e-50
 Identities = 94/134 (70%), Positives = 116/134 (86%)
 Frame = +1

Query: 4   SSGVYVLLSRVYASANRWNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPC 183
           SSGVYVLLS+VYASA RWNDVGL+R+LMSEKG+TKEPGCS+IE+DG VH+F AGDT+HP 
Sbjct: 440 SSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGDTTHPK 499

Query: 184 SKEIYRSLRDIEDRLESAGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQG 363
           S+ IY+ + +IE++LES GY+PD S APMVDE  D K  +L LHSERLAI+FG+LN++  
Sbjct: 500 SENIYKVVTEIEEKLESIGYLPDYSGAPMVDEVNDGKLNTLRLHSERLAIAFGILNSKPD 559

Query: 364 MPIRIFKNLRVCND 405
           +PIR+FKNLRVCND
Sbjct: 560 VPIRVFKNLRVCND 573


>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  198 bits (503), Expect = 4e-49
 Identities = 96/133 (72%), Positives = 112/133 (84%)
 Frame = +1

Query: 7   SGVYVLLSRVYASANRWNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCS 186
           SGVYVLLSRVYASA+RWNDVG+VR+LM++KG+ KEPGCS IE+DG  H+F AGDTSHP +
Sbjct: 423 SGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQT 482

Query: 187 KEIYRSLRDIEDRLESAGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGM 366
           +EIY +L  IE+R+E  GY PD SQAPMVDE  D KQ SL LHSERLAI+FGLL  + GM
Sbjct: 483 EEIYSALDVIEERVERVGYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGM 542

Query: 367 PIRIFKNLRVCND 405
           PIRIFKNLRVCN+
Sbjct: 543 PIRIFKNLRVCNN 555


>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Vitis vinifera]
          Length = 607

 Score =  198 bits (503), Expect = 4e-49
 Identities = 96/133 (72%), Positives = 112/133 (84%)
 Frame = +1

Query: 7   SGVYVLLSRVYASANRWNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCS 186
           SGVYVLLSRVYASA+RWNDVG+VR+LM++KG+ KEPGCS IE+DG  H+F AGDTSHP +
Sbjct: 437 SGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQT 496

Query: 187 KEIYRSLRDIEDRLESAGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGM 366
           +EIY +L  IE+R+E  GY PD SQAPMVDE  D KQ SL LHSERLAI+FGLL  + GM
Sbjct: 497 EEIYSALDVIEERVERVGYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGM 556

Query: 367 PIRIFKNLRVCND 405
           PIRIFKNLRVCN+
Sbjct: 557 PIRIFKNLRVCNN 569


>ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
           gi|355515394|gb|AES97017.1| hypothetical protein
           MTR_5g044260 [Medicago truncatula]
          Length = 565

 Score =  193 bits (491), Expect = 1e-47
 Identities = 85/132 (64%), Positives = 115/132 (87%)
 Frame = +1

Query: 10  GVYVLLSRVYASANRWNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCSK 189
           G YVLLS+VYASA+RWNDVGL+R+LM++KG++K+PGCSLIE++G  H+F AGDT+HP SK
Sbjct: 396 GAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSK 455

Query: 190 EIYRSLRDIEDRLESAGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGMP 369
           +IY+ + +I+++LES GY+PD S AP++DE  + KQ ++ LHSERLAI+FGLLN++  MP
Sbjct: 456 DIYKFMNEIQEKLESVGYLPDYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSMP 515

Query: 370 IRIFKNLRVCND 405
           IR+FKNLRVCND
Sbjct: 516 IRVFKNLRVCND 527