BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037724
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CBI30808.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
emb|CBI29241.3| unnamed protein product [Vitis vinifera]               98   8e-19

>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/86 (61%), Positives = 66/86 (76%)
 Frame = +2

Query: 8   KGKYFFEKLNWDPSVEVKLEHYACMVDILGRSGRLEEAEEFILRMPVKAEFTVWMALLSA 187
           KG+  F+  + + S EVKL+HYACMVDILGRSG+LEEAEE I  MPVKA   VW+ LLSA
Sbjct: 423 KGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSA 482

Query: 188 CKVHSNLDVATRAAHRVMDIEPHNSA 265
           C +HS L+VA RAA  ++D+EPH S+
Sbjct: 483 CTMHSKLEVAERAAKCIIDLEPHCSS 508


>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/86 (61%), Positives = 66/86 (76%)
 Frame = +2

Query: 8   KGKYFFEKLNWDPSVEVKLEHYACMVDILGRSGRLEEAEEFILRMPVKAEFTVWMALLSA 187
           KG+  F+  + + S EVKL+HYACMVDILGRSG+LEEAEE I  MPVKA   VW+ LLSA
Sbjct: 407 KGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSA 466

Query: 188 CKVHSNLDVATRAAHRVMDIEPHNSA 265
           C +HS L+VA RAA  ++D+EPH S+
Sbjct: 467 CTMHSKLEVAERAAKCIIDLEPHCSS 492


>ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|222875393|gb|EEF12524.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/86 (56%), Positives = 67/86 (77%)
 Frame = +2

Query: 8   KGKYFFEKLNWDPSVEVKLEHYACMVDILGRSGRLEEAEEFILRMPVKAEFTVWMALLSA 187
           KG+ FFE ++   S  ++ +HYACMVDILGR G+L+EAEE +  MPVKA   +W+ALLSA
Sbjct: 422 KGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA 481

Query: 188 CKVHSNLDVATRAAHRVMDIEPHNSA 265
           C+VHSNL+VA RAA  ++D+EP+ S+
Sbjct: 482 CRVHSNLEVAERAAKHILDLEPNCSS 507


>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 2   LDKGKYFFEKLNWDPSVEVKLEHYACMVDILGRSGRLEEAEEFILRMPVKAEFTVWMALL 181
           L K + FF       SV + +EHY  MVD+LGR G LEEAE  ++ MP+KA   VW+ALL
Sbjct: 466 LQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALL 525

Query: 182 SACKVHSNLDVATRAAHRVMDIEPHNSA 265
           SAC+ HSNLD+A RAA+++ +IEP  SA
Sbjct: 526 SACRKHSNLDLAKRAANQIFEIEPDCSA 553


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 40/87 (45%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   LDKGKYFFEKLNWDPSVEVKLEHYACMVDILGRSGRLEEAEEFILRMPVKAEFTVWMALL 181
           +++G++FF+ +     +E ++EHY CMVD+LGR+G LEE+EE IL MP+K +  +W ALL
Sbjct: 259 VNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALL 318

Query: 182 SACKVHSNLDVATRAAHRVMDIEPHNS 262
            ACK+H N+++  R A  +M++ PH+S
Sbjct: 319 GACKMHGNVEMGKRVAEHLMELAPHDS 345