BLASTX nr result

ID: Coptis24_contig00037718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037718
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525254.1| transcription factor, putative [Ricinus comm...   208   3e-52
ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis ...   207   7e-52
emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]   207   7e-52
ref|XP_002304316.1| GRAS family transcription factor [Populus tr...   206   2e-51
gb|ADL36818.1| SCL domain class transcription factor [Malus x do...   202   2e-50

>ref|XP_002525254.1| transcription factor, putative [Ricinus communis]
           gi|223535412|gb|EEF37082.1| transcription factor,
           putative [Ricinus communis]
          Length = 440

 Score =  208 bits (530), Expect = 3e-52
 Identities = 104/131 (79%), Positives = 113/131 (86%), Gaps = 3/131 (2%)
 Frame = -3

Query: 412 YAFESSSTSS---LRNMFLKALRSLSPTIVVLVDEDADFTSNNLVCRLRSVFNFLWIPYD 242
           Y+FESSS+SS   LR MFLK+LRSL PTIVVLVDEDAD TSNNLVCRLRS FN+LWIPYD
Sbjct: 276 YSFESSSSSSMSSLRTMFLKSLRSLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIPYD 335

Query: 241 AVDTFLRRESKQRQWYEADLCWKIENVIAQEGVQRVERLETKSRWVQRMRNASLKGIPFS 62
            VDTFL R SKQRQWYEAD+CWKIENVIA EG+QRVERLE KSRWVQRMRNA+ + I F 
Sbjct: 336 TVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERLEPKSRWVQRMRNANFRSISFG 395

Query: 61  EDAVLEVKNML 29
           E+AV EVK ML
Sbjct: 396 EEAVSEVKTML 406


>ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis vinifera]
          Length = 454

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/135 (75%), Positives = 113/135 (83%)
 Frame = -3

Query: 424 NPTLYAFESSSTSSLRNMFLKALRSLSPTIVVLVDEDADFTSNNLVCRLRSVFNFLWIPY 245
           N + Y+ ESSS S  R MFLKALR+L+PTIV+LVDEDADFTSNNLVCRLRS FN+LWIPY
Sbjct: 289 NSSSYSVESSSPSYHRTMFLKALRTLNPTIVILVDEDADFTSNNLVCRLRSAFNYLWIPY 348

Query: 244 DAVDTFLRRESKQRQWYEADLCWKIENVIAQEGVQRVERLETKSRWVQRMRNASLKGIPF 65
           D +DTFL R SKQRQWYEAD+CWKIENVIA EG QRVERLE K RWVQRMRNA+ + I F
Sbjct: 349 DTMDTFLPRGSKQRQWYEADICWKIENVIAHEGPQRVERLEPKGRWVQRMRNANFRSIMF 408

Query: 64  SEDAVLEVKNMLI*H 20
           SED V EVK+ML  H
Sbjct: 409 SEDTVSEVKHMLDEH 423


>emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]
          Length = 455

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/135 (75%), Positives = 113/135 (83%)
 Frame = -3

Query: 424 NPTLYAFESSSTSSLRNMFLKALRSLSPTIVVLVDEDADFTSNNLVCRLRSVFNFLWIPY 245
           N + Y+ ESSS S  R MFLKALR+L+PTIV+LVDEDADFTSNNLVCRLRS FN+LWIPY
Sbjct: 290 NSSSYSVESSSPSYHRTMFLKALRTLNPTIVILVDEDADFTSNNLVCRLRSAFNYLWIPY 349

Query: 244 DAVDTFLRRESKQRQWYEADLCWKIENVIAQEGVQRVERLETKSRWVQRMRNASLKGIPF 65
           D +DTFL R SKQRQWYEAD+CWKIENVIA EG QRVERLE K RWVQRMRNA+ + I F
Sbjct: 350 DTMDTFLPRGSKQRQWYEADICWKIENVIAHEGPQRVERLEPKGRWVQRMRNANFRSIMF 409

Query: 64  SEDAVLEVKNMLI*H 20
           SED V EVK+ML  H
Sbjct: 410 SEDTVSEVKHMLDEH 424


>ref|XP_002304316.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841748|gb|EEE79295.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 451

 Score =  206 bits (523), Expect = 2e-51
 Identities = 100/136 (73%), Positives = 114/136 (83%), Gaps = 1/136 (0%)
 Frame = -3

Query: 424 NPTLYAFESSSTS-SLRNMFLKALRSLSPTIVVLVDEDADFTSNNLVCRLRSVFNFLWIP 248
           N   Y++ESSS+S S R MFLK+LRSL PT+VVLVDEDAD TSNNLVCRLRS FN+LWIP
Sbjct: 285 NSNTYSYESSSSSMSFRTMFLKSLRSLDPTLVVLVDEDADLTSNNLVCRLRSAFNYLWIP 344

Query: 247 YDAVDTFLRRESKQRQWYEADLCWKIENVIAQEGVQRVERLETKSRWVQRMRNASLKGIP 68
           YD VDTFL R S+QRQWYEAD+CWKIENVIA EG QRVERLE K RW+QRMRNA+ +GI 
Sbjct: 345 YDTVDTFLPRGSRQRQWYEADICWKIENVIAHEGPQRVERLEPKCRWIQRMRNANFRGIS 404

Query: 67  FSEDAVLEVKNMLI*H 20
           F++DA+ EVK ML  H
Sbjct: 405 FADDAISEVKTMLDEH 420


>gb|ADL36818.1| SCL domain class transcription factor [Malus x domestica]
          Length = 450

 Score =  202 bits (514), Expect = 2e-50
 Identities = 103/136 (75%), Positives = 110/136 (80%), Gaps = 5/136 (3%)
 Frame = -3

Query: 412 YAFE-----SSSTSSLRNMFLKALRSLSPTIVVLVDEDADFTSNNLVCRLRSVFNFLWIP 248
           YAF+     SS+T SLR MFLKALR L PTIVVLVDEDAD TSNNLVCRLRS FN+LWIP
Sbjct: 284 YAFDVASSSSSTTPSLRTMFLKALRGLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIP 343

Query: 247 YDAVDTFLRRESKQRQWYEADLCWKIENVIAQEGVQRVERLETKSRWVQRMRNASLKGIP 68
           YD VDTFL R SKQRQWYEAD+CWKIENVIA EG QRVERLE K RWVQRMRNA+ + + 
Sbjct: 344 YDTVDTFLPRGSKQRQWYEADVCWKIENVIAYEGFQRVERLEPKCRWVQRMRNANFRSVL 403

Query: 67  FSEDAVLEVKNMLI*H 20
           F EDAV EVK ML  H
Sbjct: 404 FGEDAVSEVKAMLDEH 419


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