BLASTX nr result

ID: Coptis24_contig00037654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037654
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83522.1| hypothetical protein VITISV_019056 [Vitis vinifera]   207   7e-52
ref|XP_002273037.1| PREDICTED: uncharacterized protein LOC100244...   205   4e-51
emb|CAB75430.1| putative 16kDa membrane protein [Nicotiana tabacum]   203   1e-50
gb|AEC10974.1| 16kda membrane protein [Camellia sinensis]             199   1e-49
ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209...   198   3e-49

>emb|CAN83522.1| hypothetical protein VITISV_019056 [Vitis vinifera]
          Length = 144

 Score =  207 bits (527), Expect = 7e-52
 Identities = 95/112 (84%), Positives = 104/112 (92%)
 Frame = +1

Query: 1   GFLKSPVAARNPLRLAQASNGKFTCFQRDWLRRDLNVIGFGLIGWIAPSSIPAINGNSLT 180
           GF+K+PVA RNPLR A+A  GKFTCF+RDWLR DLNVIGFGLI W+APSSIPAI+GNSLT
Sbjct: 31  GFVKAPVAPRNPLRQAKACGGKFTCFERDWLRTDLNVIGFGLIAWLAPSSIPAIDGNSLT 90

Query: 181 GLFFSSIGTELAHWPTGPALTSPFWLWMVLWHLGLFLSLTFGQIGFKGRTEE 336
           GLFFSSIGTEL+H+PTGPALTSPFWLWMV WHLGLFL LTFGQIGFKGRTE+
Sbjct: 91  GLFFSSIGTELSHFPTGPALTSPFWLWMVTWHLGLFLCLTFGQIGFKGRTED 142


>ref|XP_002273037.1| PREDICTED: uncharacterized protein LOC100244962 isoform 1 [Vitis
           vinifera] gi|359479489|ref|XP_003632280.1| PREDICTED:
           uncharacterized protein LOC100244962 isoform 2 [Vitis
           vinifera] gi|296084873|emb|CBI28282.3| unnamed protein
           product [Vitis vinifera]
          Length = 148

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/112 (83%), Positives = 103/112 (91%)
 Frame = +1

Query: 1   GFLKSPVAARNPLRLAQASNGKFTCFQRDWLRRDLNVIGFGLIGWIAPSSIPAINGNSLT 180
           GF+K+PVA RNPL  A+A  GKFTCF+RDWLR DLNVIGFGLI W+APSSIPAI+GNSLT
Sbjct: 35  GFVKAPVAPRNPLMQAKACGGKFTCFERDWLRTDLNVIGFGLIAWLAPSSIPAIDGNSLT 94

Query: 181 GLFFSSIGTELAHWPTGPALTSPFWLWMVLWHLGLFLSLTFGQIGFKGRTEE 336
           GLFFSSIGTEL+H+PTGPALTSPFWLWMV WHLGLFL LTFGQIGFKGRTE+
Sbjct: 95  GLFFSSIGTELSHFPTGPALTSPFWLWMVTWHLGLFLCLTFGQIGFKGRTED 146


>emb|CAB75430.1| putative 16kDa membrane protein [Nicotiana tabacum]
          Length = 143

 Score =  203 bits (517), Expect = 1e-50
 Identities = 95/113 (84%), Positives = 103/113 (91%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1   GFLKSPVAARNPLRLAQASNGKFTC-FQRDWLRRDLNVIGFGLIGWIAPSSIPAINGNSL 177
           G LKSPV ARNPLR+AQAS GKFTC FQRDWLRRDLNVIGFGLIGW+APSSIP ING SL
Sbjct: 27  GLLKSPVTARNPLRVAQASGGKFTCNFQRDWLRRDLNVIGFGLIGWLAPSSIPVINGKSL 86

Query: 178 TGLFFSSIGTELAHWPTGPALTSPFWLWMVLWHLGLFLSLTFGQIGFKGRTEE 336
           +GLFF SIGTEL+H+PTGPALTS FWLW+V WHLGLF+ LTFGQIGFKGRTE+
Sbjct: 87  SGLFFDSIGTELSHFPTGPALTSQFWLWLVCWHLGLFICLTFGQIGFKGRTED 139


>gb|AEC10974.1| 16kda membrane protein [Camellia sinensis]
          Length = 150

 Score =  199 bits (507), Expect = 1e-49
 Identities = 94/111 (84%), Positives = 99/111 (89%)
 Frame = +1

Query: 4   FLKSPVAARNPLRLAQASNGKFTCFQRDWLRRDLNVIGFGLIGWIAPSSIPAINGNSLTG 183
           FLKSPV  RNPL  A AS GKFTCF+RDWLR DLNVIGFGLIGW+APSS+PAINGNSLTG
Sbjct: 38  FLKSPVRVRNPLVQAHASGGKFTCFERDWLRTDLNVIGFGLIGWLAPSSVPAINGNSLTG 97

Query: 184 LFFSSIGTELAHWPTGPALTSPFWLWMVLWHLGLFLSLTFGQIGFKGRTEE 336
           LFFSSIGTEL+H+PTGPAL SPFWLWMV  HLGLFL LTFGQIG KGRTEE
Sbjct: 98  LFFSSIGTELSHFPTGPALDSPFWLWMVCCHLGLFLCLTFGQIGIKGRTEE 148


>ref|XP_004139499.1| PREDICTED: uncharacterized protein LOC101209111 [Cucumis sativus]
          Length = 146

 Score =  198 bits (504), Expect = 3e-49
 Identities = 90/112 (80%), Positives = 101/112 (90%)
 Frame = +1

Query: 1   GFLKSPVAARNPLRLAQASNGKFTCFQRDWLRRDLNVIGFGLIGWIAPSSIPAINGNSLT 180
           GF+K PVAARNPL +A AS GKFTCF+RDWLRRDLNVIGFGLIGWIAPSSIP I+G SLT
Sbjct: 31  GFIKPPVAARNPLSVAGASGGKFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVISGKSLT 90

Query: 181 GLFFSSIGTELAHWPTGPALTSPFWLWMVLWHLGLFLSLTFGQIGFKGRTEE 336
           GLFF SIG ELAH+P+ PALTS FWLW++ WHLGLF++LTFGQIGFKGRTE+
Sbjct: 91  GLFFESIGAELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTED 142


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